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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00908
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00908
Identity
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-29_212-357
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.54 | 26.0 | 3.54e-01 | 73.2% | 92.6% |
D2
high
residues 46-126
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 57.0 | 3.80e-01 | 93.8% | 86.9% |
| 2fji102 | 1.10.357.70 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain | 0.67 | 48.0 | 3.64e-01 | 74.1% | 40.0% |
| 1lj2A00 | 1.20.5.970 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein | 0.67 | 46.0 | 4.24e-01 | 79.0% | 54.7% |
| 2p6vA00 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.67 | 47.0 | 4.43e-01 | 72.8% | 97.9% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.63 | 53.0 | 4.77e-01 | 100.0% | 67.9% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.60 | 51.0 | 4.55e-01 | 100.0% | 96.8% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.60 | 50.0 | 3.23e-01 | 95.1% | 63.9% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 42.0 | 3.94e-01 | 74.1% | 94.1% |
| 1cm5A00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.60 | 52.0 | 3.04e-01 | 100.0% | 56.5% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 50.0 | 4.38e-01 | 100.0% | 79.9% |
| 6wfqC01 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.59 | 42.0 | 3.52e-01 | 75.3% | 68.3% |
| 3e7qA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 42.0 | 3.25e-01 | 80.2% | 63.5% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.57 | 50.0 | 5.00e-01 | 98.8% | 95.3% |
| 7r5yA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.57 | 49.0 | 3.21e-01 | 100.0% | 45.2% |
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.56 | 47.0 | 4.41e-01 | 98.8% | 87.6% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 4.15e-01 | 100.0% | 77.0% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.55 | 48.0 | 3.80e-01 | 100.0% | 48.9% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.55 | 46.0 | 4.61e-01 | 100.0% | 97.7% |
| 1jliA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 43.0 | 3.89e-01 | 86.4% | 82.1% |
| 3vkgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.54 | 41.0 | 3.47e-01 | 82.7% | 90.5% |
| 3ly7A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 43.0 | 3.49e-01 | 86.4% | 93.8% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.54 | 45.0 | 4.29e-01 | 100.0% | 80.6% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.54 | 44.0 | 4.35e-01 | 91.4% | 90.7% |
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.54 | 41.0 | 3.89e-01 | 85.2% | 87.0% |
| 6azyA01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.53 | 40.0 | 3.48e-01 | 81.5% | 77.1% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.53 | 40.0 | 3.96e-01 | 82.7% | 80.2% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.52 | 35.0 | 3.82e-01 | 75.3% | 84.8% |
| 8hk0B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 42.0 | 3.61e-01 | 91.4% | 82.6% |
| 6k9pB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.52 | 43.0 | 3.60e-01 | 96.3% | 84.2% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 43.0 | 3.97e-01 | 100.0% | 92.1% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.51 | 34.0 | 3.82e-01 | 80.2% | 94.8% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 44.0 | 4.24e-01 | 100.0% | 88.3% |
| 1nubA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 35.0 | 3.02e-01 | 74.1% | 96.5% |
| 1rrsA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.50 | 43.0 | 3.90e-01 | 96.3% | 74.8% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029967 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.68 | 60.0 | 5.30e-01 | 100.0% | 68.7% |
| 3939372 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 51.0 | 3.87e-01 | 81.5% | 57.4% |
| 4457750 | 3567.1.1.112 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › AI-2E_transport | 0.66 | 54.0 | 4.90e-01 | 100.0% | 66.4% |
| 4223064 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.65 | 57.0 | 3.74e-01 | 100.0% | 71.0% |
| 4789617 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 46.0 | 4.42e-01 | 100.0% | 66.0% |
| 4998642 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.63 | 47.0 | 3.65e-01 | 98.8% | 34.0% |
| 5041310 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.63 | 53.0 | 3.85e-01 | 100.0% | 32.1% |
| 3243228 | 109.4.1.1323 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IMB1 | 0.63 | 43.0 | 2.94e-01 | 72.8% | 20.6% |
| 4016102 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 44.0 | 3.76e-01 | 75.3% | 85.9% |
| 4983708 | 3419.1.1.0 ↗ | alpha bundles › Antitoxin VbhA › Antitoxin VbhA › Antitoxin VbhA | 0.60 | 46.0 | 4.74e-01 | 82.7% | 86.7% |
| 4588604 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 52.0 | 3.63e-01 | 100.0% | 53.0% |
| 3917085 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 41.0 | 3.99e-01 | 74.1% | 91.6% |
| 3600608 | 150.3.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine | 0.59 | 52.0 | 4.70e-01 | 97.5% | 84.5% |
| 3631365 | 5059.1.1.4 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Nuc_sug_transp | 0.59 | 48.0 | 3.35e-01 | 92.6% | 78.2% |
| 3833474 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.59 | 40.0 | 3.81e-01 | 71.6% | 60.0% |
| 3942099 | 605.1.1.209 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › AI-2E_transport | 0.59 | 51.0 | 4.80e-01 | 100.0% | 82.0% |
| 5032763 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.58 | 51.0 | 3.29e-01 | 100.0% | 50.6% |
| 3392306 | 109.4.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 | 0.58 | 51.0 | 3.80e-01 | 97.5% | 40.5% |
| 3588945 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.58 | 49.0 | 4.44e-01 | 96.3% | 78.3% |
| 4946202 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 49.0 | 4.92e-01 | 100.0% | 96.2% |
| 4953656 | 5054.1.1.68 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › AI-2E_transport | 0.58 | 50.0 | 4.09e-01 | 100.0% | 51.9% |
| 3578718 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.57 | 51.0 | 4.82e-01 | 97.5% | 85.3% |
| 3404835 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 45.0 | 3.90e-01 | 100.0% | 54.6% |
| 3598971 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 46.0 | 3.84e-01 | 91.4% | 61.4% |
| 3503572 | 109.4.1.1711 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29567 | 0.55 | 48.0 | 3.55e-01 | 100.0% | 80.0% |
| 3781957 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.55 | 46.0 | 3.45e-01 | 95.1% | 80.9% |
| 3174902 | 611.1.1.1 ↗ | alpha bundles › N-cbl like › Transferrin receptor ectodomain, C-terminal domain › Transferrin receptor ectodomain, C-terminal domain › TFR_dimer | 0.54 | 43.0 | 3.56e-01 | 90.1% | 96.9% |
| 3432597 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 43.0 | 3.98e-01 | 86.4% | 77.1% |
| 3211383 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.54 | 41.0 | 3.89e-01 | 82.7% | 75.0% |
| 185159 | 3552.1.1.1 ↗ | alpha arrays › Pfam family PF09836 N-terminal domain › Pfam family PF09836 N-terminal domain › Pfam family PF09836 N-terminal domain › DUF2063 | 0.54 | 44.0 | 4.30e-01 | 91.4% | 87.6% |
| 3713234 | 3187.1.1.0 ↗ | alpha bundles › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein | 0.53 | 43.0 | 3.39e-01 | 91.4% | 70.3% |
| 4364663 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.52 | 46.0 | 4.17e-01 | 100.0% | 78.2% |
| 4958739 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.52 | 41.0 | 3.48e-01 | 100.0% | 50.7% |
| 3820984 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.52 | 38.0 | 4.00e-01 | 77.8% | 94.3% |
| 3198398 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.51 | 40.0 | 3.23e-01 | 88.9% | 83.9% |
| 3822690 | 109.4.1.204 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ | 0.51 | 46.0 | 3.43e-01 | 100.0% | 41.5% |
| 3219299 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.50 | 43.0 | 3.63e-01 | 95.1% | 92.1% |
| 4044771 | 109.4.1.546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ecm29 | 0.50 | 44.0 | 3.50e-01 | 100.0% | 47.9% |
| 4962556 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.50 | 42.0 | 3.81e-01 | 97.5% | 90.4% |
D3
high
residues 128-196
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 53.0 | 4.76e-01 | 89.9% | 60.2% |
| 4w8iA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 46.0 | 3.86e-01 | 88.4% | 43.0% |
| 2e7jA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 46.0 | 3.98e-01 | 89.9% | 46.4% |
| 3mc6A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 45.0 | 3.70e-01 | 91.3% | 39.7% |
| 3n2qA02 | 3.30.300.190 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.64 | 55.0 | 4.70e-01 | 100.0% | 72.4% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 50.0 | 4.08e-01 | 94.2% | 45.2% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 48.0 | 4.64e-01 | 95.7% | 72.5% |
| 1o69A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 52.0 | 4.14e-01 | 92.8% | 56.7% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.62 | 49.0 | 4.14e-01 | 88.4% | 53.7% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 49.0 | 4.83e-01 | 94.2% | 83.6% |
| 1w23A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 46.0 | 4.06e-01 | 88.4% | 54.4% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 48.0 | 3.93e-01 | 89.9% | 61.6% |
| 3n75A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 50.0 | 3.73e-01 | 91.3% | 47.6% |
| 1kvkA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.60 | 49.0 | 3.87e-01 | 91.3% | 83.1% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 50.0 | 4.52e-01 | 100.0% | 68.0% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 41.0 | 3.18e-01 | 72.5% | 45.1% |
| 2douB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 47.0 | 3.67e-01 | 87.0% | 99.3% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 49.0 | 4.29e-01 | 100.0% | 79.1% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.58 | 44.0 | 4.02e-01 | 88.4% | 61.7% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 43.0 | 4.24e-01 | 84.1% | 79.2% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 47.0 | 3.99e-01 | 100.0% | 87.3% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 46.0 | 3.86e-01 | 98.6% | 49.6% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.57 | 46.0 | 4.37e-01 | 91.3% | 76.8% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 4.48e-01 | 98.6% | 83.3% |
| 2aleA00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.56 | 48.0 | 3.96e-01 | 98.6% | 98.5% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.56 | 42.0 | 3.67e-01 | 100.0% | 50.4% |
| 2cteA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 45.0 | 4.38e-01 | 89.9% | 81.0% |
| 3b8oA01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.55 | 44.0 | 3.19e-01 | 92.8% | 75.9% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.55 | 46.0 | 3.34e-01 | 97.1% | 76.1% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.55 | 44.0 | 4.29e-01 | 100.0% | 85.7% |
| 4lrjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 46.0 | 4.56e-01 | 100.0% | 91.8% |
| 2xhcA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.53 | 38.0 | 3.54e-01 | 100.0% | 57.9% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.19e-01 | 87.0% | 87.3% |
| 2kfpA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 39.0 | 3.27e-01 | 82.6% | 44.8% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 42.0 | 3.61e-01 | 100.0% | 53.1% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 45.0 | 3.64e-01 | 100.0% | 89.1% |
| 1rxxC01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.51 | 41.0 | 2.77e-01 | 95.7% | 52.0% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.51 | 40.0 | 3.62e-01 | 100.0% | 60.4% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.50e-01 | 98.6% | 78.0% |
| 5xnyA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.51 | 44.0 | 3.03e-01 | 97.1% | 68.4% |
| 2kz0A01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.51 | 41.0 | 4.07e-01 | 95.7% | 91.5% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.51e-01 | 100.0% | 77.5% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971560 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.69 | 52.0 | 5.33e-01 | 100.0% | 86.2% |
| 3972831 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.67 | 51.0 | 4.89e-01 | 88.4% | 72.5% |
| 5052318 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.66 | 50.0 | 4.91e-01 | 88.4% | 76.7% |
| 3604612 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.66 | 52.0 | 5.13e-01 | 89.9% | 92.0% |
| 3215882 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.66 | 54.0 | 5.07e-01 | 100.0% | 73.3% |
| 4230972 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.65 | 50.0 | 4.72e-01 | 88.4% | 68.2% |
| 4622751 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.65 | 46.0 | 4.08e-01 | 79.7% | 49.5% |
| 5012054 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.65 | 47.0 | 4.77e-01 | 92.8% | 80.0% |
| 3412448 | 321.1.1.3 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › ATP-gua_Ptrans | 0.64 | 51.0 | 3.39e-01 | 88.4% | 41.0% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.64 | 46.0 | 4.26e-01 | 84.1% | 58.9% |
| 3838454 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.63 | 53.0 | 5.12e-01 | 98.6% | 92.5% |
| 5030904 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.63 | 45.0 | 4.58e-01 | 94.2% | 77.1% |
| 3785836 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 49.0 | 4.69e-01 | 91.3% | 73.8% |
| 3626403 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.63 | 47.0 | 4.75e-01 | 87.0% | 80.0% |
| 3839682 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 51.0 | 4.81e-01 | 91.3% | 74.7% |
| 4965204 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.63 | 53.0 | 4.53e-01 | 98.6% | 70.8% |
| 4031138 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.62 | 46.0 | 4.85e-01 | 81.2% | 90.0% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.62 | 50.0 | 3.37e-01 | 98.6% | 22.1% |
| 4943247 | 4955.1.1.12 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.62 | 44.0 | 4.12e-01 | 89.9% | 58.9% |
| 3195236 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 53.0 | 4.84e-01 | 97.1% | 73.3% |
| None | — | 0.61 | 50.0 | 3.05e-01 | 94.2% | 47.9% | |
| 3232695 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 48.0 | 4.25e-01 | 100.0% | 58.1% |
| 4092520 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.60 | 49.0 | 4.24e-01 | 92.8% | 57.4% |
| 3236581 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 46.0 | 4.57e-01 | 94.2% | 78.7% |
| 4983540 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.60 | 49.0 | 4.79e-01 | 94.2% | 87.2% |
| 4982514 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.60 | 47.0 | 4.67e-01 | 92.8% | 84.0% |
| 3713128 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.60 | 45.0 | 4.51e-01 | 94.2% | 81.4% |
| 5033573 | 304.4.1.75 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD | 0.59 | 46.0 | 4.24e-01 | 94.2% | 64.2% |
| 5052336 | 304.4.1.75 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD | 0.59 | 46.0 | 4.25e-01 | 100.0% | 65.3% |
| 5037971 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.59 | 45.0 | 3.82e-01 | 87.0% | 85.6% |
| 4238391 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 45.0 | 3.97e-01 | 91.3% | 53.9% |
| 4885808 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.57 | 41.0 | 4.11e-01 | 84.1% | 75.7% |
| 5054097 | 305.1.1.10 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › PF27806 | 0.57 | 45.0 | 4.26e-01 | 89.9% | 71.8% |
| 3739949 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.57 | 45.0 | 4.31e-01 | 89.9% | 72.9% |
| 4277752 | 3016.1.1.10 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P | 0.57 | 41.0 | 3.78e-01 | 81.2% | 56.8% |
| 3676311 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.57 | 47.0 | 2.98e-01 | 100.0% | 58.4% |
| 4679172 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.57 | 45.0 | 4.40e-01 | 94.2% | 81.2% |
| 4821040 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.57 | 48.0 | 3.44e-01 | 100.0% | 79.0% |
| 5010022 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.56 | 47.0 | 4.48e-01 | 98.6% | 81.2% |
| 5076912 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.56 | 43.0 | 4.20e-01 | 88.4% | 77.3% |
| 4934956 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.56 | 45.0 | 4.30e-01 | 94.2% | 96.5% |
| 5076573 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.56 | 45.0 | 4.43e-01 | 100.0% | 83.7% |
| 4567496 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 44.0 | 4.33e-01 | 91.3% | 85.3% |
| 4095823 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 44.0 | 4.15e-01 | 92.8% | 76.1% |
| 3689996 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 40.0 | 4.12e-01 | 79.7% | 83.1% |
| 4126306 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 45.0 | 4.27e-01 | 95.7% | 81.2% |
| 4048493 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 42.0 | 4.14e-01 | 91.3% | 82.5% |
| 3409964 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 47.0 | 3.10e-01 | 100.0% | 82.5% |
| 3285016 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.54 | 41.0 | 3.89e-01 | 92.8% | 66.7% |
| 5000514 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.53 | 42.0 | 4.03e-01 | 94.2% | 75.0% |
| 3739712 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.53 | 43.0 | 3.68e-01 | 98.6% | 94.6% |
| 4531300 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.53 | 37.0 | 3.52e-01 | 87.0% | 61.2% |
| 3926106 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.52 | 43.0 | 3.50e-01 | 94.2% | 97.1% |
| 4959169 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.52 | 43.0 | 3.48e-01 | 100.0% | 89.0% |
| 3169426 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.52 | 44.0 | 2.53e-01 | 98.6% | 21.8% |
| 3612606 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.52 | 45.0 | 3.90e-01 | 100.0% | 81.8% |
| 3724623 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 44.0 | 2.72e-01 | 98.6% | 26.0% |
| 6628 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.52 | 42.0 | 3.61e-01 | 100.0% | 53.1% |
| 4955353 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.38e-01 | 84.1% | 58.3% |