Immediate_early_protein1

Euk-Vir

Perigonia_lusca_single_nucleopolyhedrovirus

Immediate_early_protein1__YP_009165619__Perigonia_lusca_single_nucleopolyhedrovirus__1675865

Identity

72.3 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Perigonia_lusca_single_nucleopolyhedrovirus

TaxID: 1675865

View cluster (5 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-107_109-213

PDB

Domain cluster: rep: IE-1__YP_009330138__Plodia_interpunctella_granulovirus__262175__D62-179

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03430.21 best	TATR	183.8	8.20e-54	100.0%	35.0%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1mfwA00	3.10.20.230	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain	0.51	33.0	3.88e-01	77.7%	97.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3935314	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.54	42.0	3.00e-01	80.3%	88.1%
3615278	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.51	29.0	3.72e-01	86.6%	94.7%

D2 high residues 255-455

PDB

Domain cluster: rep: IE-1__YP_009552572__Operophtera_brumata_nucleopolyhedrovirus__1046267__D273-305_322-485

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03430.21 best	TATR	258.9	1.30e-76	97.5%	43.6%