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Intein_splicing_superfamily_domain

Euk-Vir

Pandoravirus_salinus

Intein_splicing_superfamily_domain__YP_008437257__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437257 ↗
Protein ID:
Intein_splicing_superfamily_domain
Kingdom:
euk

Quality

60.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-53_127-230
PDB
D2 medium residues 89-126_617-662
PDB
Domain cluster: rep: OQ436456.1__WEU67403.1__X__00136__D1-82
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00268.28 best Ribonuc_red_sm 99.2 3.80e-28 100.0% 28.5%
D3 medium residues 234-314
PDB
D4 medium residues 315-511
PDB
D5 medium residues 663-681_769-813
PDB
Domain cluster: rep: ORF54__NP_733908__Callitrichine_gammaherpesvirus_3__106331__D213-276
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00268.28 best Ribonuc_red_sm 42.9 5.60e-11 70.3% 15.3%
D6 medium residues 682-768
PDB
Domain cluster: rep: hypothetical_protein_AP054_gp118__YP_009173130__Ostreococcus_lucimarinus_virus_7__1663209__D223-313
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00268.28 best Ribonuc_red_sm 113.8 1.40e-32 100.0% 32.7%