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Intermediate_transcription_factor_VITF-3

Euk-Vir

Sheeppox_virus

Intermediate_transcription_factor_VITF-3__NP_659687__Sheeppox_virus__10266

Identity

Accession:
NP_659687 ↗
Protein ID:
Intermediate_transcription_factor_VITF-3
Kingdom:
euk

Quality

85.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Capripoxvirus› Sheeppox_virus

TaxID: 10266

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-25_270-385
PDB
Domain cluster: rep: VITF-3_45_kDA_large_subunit__YP_009143451__Raccoonpox_virus__10256__D1-23_271-382
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF05718.18 best Pox_int_trans 159.6 1.40e-46 81.6% 29.3%
PF05718.18 Pox_int_trans 30.2 2.80e-07 21.3% 7.1%
D2 medium residues 26-77_196-269
PDB
Domain cluster: rep: VITF-3_45kda_subunit_-Cop-A23R-__YP_008004520__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D23-101_197-266
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF05718.18 best Pox_int_trans 120.4 1.10e-34 59.5% 18.9%
PF05718.18 Pox_int_trans 53.0 3.30e-14 42.1% 12.6%
D3 medium residues 78-195
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05718.18 best Pox_int_trans 161.7 3.20e-47 100.0% 30.1%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dkhA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.70 32.0 3.31e-01 83.1% 44.7%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 27.0 3.24e-01 78.0% 57.0%
2j3tD01 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 36.0 3.50e-01 78.0% 60.4%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 38.0 3.80e-01 80.5% 72.3%
3cueC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 36.0 3.35e-01 78.0% 57.3%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 22.0 2.85e-01 78.0% 68.2%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 37.0 3.69e-01 80.5% 73.1%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 37.0 3.63e-01 80.5% 66.9%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.50 29.0 3.73e-01 77.1% 100.0%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 30.0 3.07e-01 77.1% 60.0%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2755260 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 30.0 3.17e-01 83.9% 50.0%
3999005 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 33.0 4.38e-01 83.1% 98.5%
4951845 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.58 30.0 3.63e-01 83.9% 77.3%
3628935 1181.1.1.0 ↗ 0.57 30.0 3.95e-01 84.7% 92.3%
6873 223.2.1.15 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.56 31.0 3.00e-01 78.8% 44.3%
2073961 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.54 33.0 3.51e-01 96.6% 68.3%
2553536 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 38.0 3.69e-01 80.5% 64.7%
5026576 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.53 30.0 3.47e-01 77.1% 75.3%
4353272 2003.1.2.21 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Trp_halogenase 0.53 38.0 2.46e-01 91.5% 15.0%
3825338 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 34.0 3.26e-01 80.5% 56.3%
4948154 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 38.0 3.76e-01 80.5% 69.6%
5050074 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 38.0 3.69e-01 82.2% 65.9%
5077954 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 35.0 3.45e-01 78.0% 62.3%
3705571 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 33.0 3.08e-01 81.4% 51.7%
5050119 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.52 31.0 3.56e-01 78.0% 78.9%
4945857 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 34.0 3.34e-01 78.0% 62.4%
3471938 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.51 38.0 3.45e-01 78.0% 65.6%
5041753 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 38.0 3.84e-01 83.1% 78.3%
3460642 223.2.1.8 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.51 37.0 3.46e-01 78.8% 61.5%
5044703 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 33.0 3.32e-01 78.0% 64.2%
5065158 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 3.52e-01 84.7% 61.3%
3528858 274.1.1.47 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › UPF0492 0.51 39.0 3.97e-01 83.1% 97.5%
3691605 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.50 34.0 3.29e-01 85.6% 61.5%
3175956 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 31.0 2.98e-01 78.0% 52.9%
4945423 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 34.0 3.61e-01 81.4% 78.1%