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Intracellular_viral_protein
Euk-VirMonkeypox_virus
Intracellular_viral_protein__YP_010377166__Monkeypox_virus__10244
Identity
- Accession:
- YP_010377166 ↗
- Protein ID:
- Intracellular_viral_protein
- Kingdom:
- euk
Quality
74.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Monkeypox_virus
TaxID: 10244
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-217
Domain cluster:
rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04490.18 best | Pox_T4_C | 51.0 | 2.60e-13 | 73.0% | 89.7% |
| PF04491.17 | Pox_T4_N | 80.7 | 7.80e-23 | 25.4% | 100.0% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hkjD00 | 2.60.240.30 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › | 0.93 | 83.0 | 8.38e-01 | 91.5% | 95.2% |
| 3on9A00 | 2.60.240.20 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › | 0.75 | 61.0 | 6.59e-01 | 89.9% | 98.8% |
| 3mjgX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.74 | 35.0 | 4.72e-01 | 72.5% | 83.2% |
| 4ofdB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 31.0 | 4.21e-01 | 71.4% | 86.3% |
| 2vgaA00 | 2.60.240.10 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein | 0.65 | 55.0 | 5.54e-01 | 88.4% | 96.4% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 31.0 | 4.01e-01 | 97.4% | 81.4% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 31.0 | 4.11e-01 | 72.5% | 86.5% |
| 2x9zA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.57 | 33.0 | 3.99e-01 | 100.0% | 90.3% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.56 | 27.0 | 3.14e-01 | 74.6% | 61.3% |
| 3c18A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 30.0 | 3.72e-01 | 79.9% | 86.1% |
| 5g47A01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 24.0 | 3.36e-01 | 72.5% | 88.0% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 37.0 | 3.43e-01 | 72.5% | 82.0% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 33.0 | 3.71e-01 | 88.4% | 83.6% |
| 4ebjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 31.0 | 3.64e-01 | 83.6% | 85.9% |
| 1olrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 35.0 | 3.39e-01 | 70.9% | 97.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 221111 | 527.1.1.2 ↗ | beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI | 0.93 | 83.0 | 8.38e-01 | 91.5% | 95.2% |
| 1851633 | 316.1.1.22 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTF-like | 0.55 | 30.0 | 3.74e-01 | 79.9% | 86.8% |
| 3588213 | 12.3.1.45 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2264_C | 0.54 | 41.0 | 3.65e-01 | 77.8% | 93.7% |
| 4073000 | 316.1.1.22 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTF-like | 0.54 | 30.0 | 3.70e-01 | 81.0% | 89.1% |
| 3971095 | 4334.1.1.0 ↗ | beta complex topology › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins | 0.54 | 23.0 | 3.23e-01 | 83.6% | 85.0% |
| 5030995 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.53 | 32.0 | 3.57e-01 | 81.5% | 73.3% |
| 4927404 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.53 | 29.0 | 3.61e-01 | 79.4% | 87.0% |