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J-domain_protein

Euk-Vir

Nile_crocodilepox_virus

J-domain_protein__YP_784220__Nile_crocodilepox_virus__1285600

Identity

Accession:
YP_784220 ↗
Protein ID:
J-domain_protein
Kingdom:
euk

Quality

57.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Crocodylidpoxvirus› Nile_crocodilepox_virus

TaxID: 1285600

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 119-211
PDB
D2 medium residues 6-113
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00226.37 best DnaJ 44.6 1.80e-11 48.1% 79.4%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lz8B02 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.81 48.0 5.34e-01 88.9% 73.0%
3c18A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.68 28.0 2.76e-01 89.8% 36.5%
2ctqA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.66 47.0 5.01e-01 91.7% 83.0%
4j7zF00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.60 48.0 5.13e-01 91.7% 94.7%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 42.0 3.31e-01 92.6% 92.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3236061 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.85 52.0 6.48e-01 78.7% 95.7%
3610628 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.84 50.0 6.36e-01 100.0% 94.3%
3392375 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.83 48.0 6.01e-01 73.1% 90.0%
3613093 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.83 51.0 5.30e-01 92.6% 67.0%
3882664 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.81 52.0 6.29e-01 81.5% 94.7%
3860819 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.81 48.0 4.81e-01 89.8% 59.1%
3572266 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.80 53.0 6.34e-01 84.3% 97.3%
4260118 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.80 46.0 5.29e-01 89.8% 77.5%
3789564 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.78 51.0 5.06e-01 92.6% 64.5%
3170185 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.78 50.0 6.06e-01 82.4% 94.7%
3669460 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.78 50.0 5.60e-01 91.7% 82.4%
3413866 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.76 55.0 6.15e-01 84.3% 95.3%
4583718 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.75 47.0 4.77e-01 89.8% 64.8%
3385830 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.75 48.0 5.67e-01 85.2% 93.3%
4608202 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.72 46.0 4.75e-01 88.9% 67.6%
4153575 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.71 44.0 4.40e-01 89.8% 60.9%
4043619 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.71 44.0 5.19e-01 89.8% 90.7%
3598889 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.70 49.0 5.48e-01 89.8% 90.6%
3799892 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.70 48.0 5.41e-01 79.6% 89.4%
4386574 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.69 51.0 5.71e-01 77.8% 96.5%
3838373 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.69 44.0 4.69e-01 88.9% 74.2%
3583947 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.62 50.0 4.98e-01 92.6% 81.8%
3406718 2498.1.1.11 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N 0.60 45.0 3.01e-01 77.8% 77.9%
4219674 55.1.1.1 ↗ beta barrels › Urease metallochperone UreE-N › Urease metallochperone UreE-N › Urease metallochperone UreE-N › UreE_N 0.60 38.0 4.19e-01 94.4% 81.2%
2581413 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.57 45.0 4.92e-01 98.1% 98.9%