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JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00086
Bact-VirJBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00086
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-252
Domain cluster:
rep: NC_024137.1__YP_009031307.1__Bcp1_027__00026__D130-304
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04285.19 best | DUF444 | 143.6 | 1.40e-41 | 97.7% | 40.7% |
D2
medium
residues 3-69
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e21B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.71 | 50.0 | 3.88e-01 | 73.1% | 86.9% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 41.0 | 2.97e-01 | 76.1% | 50.7% |
| 1wloA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.57 | 41.0 | 3.33e-01 | 77.6% | 83.1% |
| 3mhsB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.55 | 32.0 | 2.90e-01 | 89.6% | 40.7% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 41.0 | 3.28e-01 | 89.6% | 63.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3725619 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.55 | 44.0 | 2.81e-01 | 85.1% | 29.0% |
| 3588075 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.55 | 47.0 | 3.62e-01 | 91.0% | 70.0% |
| 3262601 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.55 | 40.0 | 3.85e-01 | 83.6% | 100.0% |
| 5074986 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.53 | 40.0 | 2.98e-01 | 83.6% | 50.5% |
| 3593408 | 3952.1.1.0 ↗ | few secondary structure elements › Pre-mRNA-splicing factor BUD31 › Pre-mRNA-splicing factor BUD31 › Pre-mRNA-splicing factor BUD31 | 0.53 | 35.0 | 2.93e-01 | 70.1% | 56.3% |
| 3788865 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.50 | 36.0 | 3.38e-01 | 74.6% | 90.0% |