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JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00121
Bact-VirJBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00121
Identity
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-58
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 70.0 | 6.54e-01 | 100.0% | 96.6% |
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 63.0 | 6.31e-01 | 100.0% | 92.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 67.0 | 5.66e-01 | 100.0% | 72.2% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 65.0 | 5.44e-01 | 100.0% | 70.2% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 65.0 | 5.32e-01 | 100.0% | 53.3% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 60.0 | 5.25e-01 | 89.6% | 95.8% |
| 1sf9A02 | 2.30.30.340 | Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains | 0.73 | 60.0 | 5.86e-01 | 100.0% | 83.3% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 64.0 | 4.75e-01 | 100.0% | 48.7% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 64.0 | 5.74e-01 | 100.0% | 87.9% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 59.0 | 6.01e-01 | 100.0% | 95.7% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 63.0 | 5.55e-01 | 100.0% | 82.9% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 54.0 | 4.40e-01 | 85.4% | 70.8% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 63.0 | 5.87e-01 | 100.0% | 96.7% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 61.0 | 5.50e-01 | 100.0% | 95.6% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 60.0 | 5.69e-01 | 97.9% | 81.4% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.70 | 60.0 | 5.44e-01 | 100.0% | 83.6% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 54.0 | 4.58e-01 | 95.8% | 51.8% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 59.0 | 4.92e-01 | 100.0% | 77.1% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.66 | 55.0 | 5.42e-01 | 100.0% | 92.6% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 4.86e-01 | 89.6% | 95.1% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 54.0 | 4.76e-01 | 97.9% | 88.2% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 4.70e-01 | 100.0% | 69.1% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 50.0 | 4.74e-01 | 89.6% | 98.3% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 45.0 | 4.00e-01 | 89.6% | 57.5% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 42.0 | 3.92e-01 | 91.7% | 76.1% |
| 5i0qB02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.54 | 36.0 | 3.36e-01 | 70.8% | 77.4% |
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.52 | 35.0 | 3.50e-01 | 85.4% | 64.2% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 3.16e-01 | 93.8% | 96.5% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.50 | 37.0 | 3.67e-01 | 85.4% | 68.6% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.50 | 36.0 | 3.49e-01 | 83.3% | 77.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781711 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.80 | 63.0 | 6.05e-01 | 97.9% | 76.4% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 69.0 | 6.63e-01 | 100.0% | 85.5% |
| 3603357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 68.0 | 6.53e-01 | 100.0% | 85.5% |
| 4225207 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.77 | 61.0 | 5.71e-01 | 97.9% | 70.0% |
| 4988106 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 62.0 | 4.84e-01 | 87.5% | 87.0% |
| 4946165 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 66.0 | 6.32e-01 | 100.0% | 83.6% |
| 3230400 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 6.16e-01 | 100.0% | 96.9% |
| 5075805 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 62.0 | 6.00e-01 | 100.0% | 81.8% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 63.0 | 6.04e-01 | 100.0% | 81.8% |
| 146634 | 4.1.1.119 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5606 | 0.75 | 63.0 | 6.35e-01 | 100.0% | 93.9% |
| 3240651 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.75 | 68.0 | 5.69e-01 | 100.0% | 70.0% |
| 3934655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 67.0 | 5.45e-01 | 97.9% | 98.8% |
| 5040416 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 62.0 | 6.13e-01 | 97.9% | 88.0% |
| 3486330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 59.0 | 5.92e-01 | 100.0% | 86.0% |
| 5017214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 63.0 | 6.07e-01 | 100.0% | 83.6% |
| 3598284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 60.0 | 5.79e-01 | 100.0% | 80.0% |
| 3761440 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 59.0 | 5.66e-01 | 100.0% | 78.2% |
| 603 | 4.1.1.62 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1811 | 0.73 | 60.0 | 5.90e-01 | 100.0% | 84.9% |
| 3236054 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.73 | 65.0 | 5.58e-01 | 100.0% | 76.0% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.71 | 61.0 | 5.85e-01 | 100.0% | 85.5% |
| 3961546 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 58.0 | 5.36e-01 | 100.0% | 70.8% |
| 4284598 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.69 | 59.0 | 4.83e-01 | 97.9% | 64.4% |
| 4972872 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.69 | 55.0 | 5.68e-01 | 97.9% | 97.8% |
| 3306580 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 5.10e-01 | 91.7% | 98.3% |
| 3659855 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 58.0 | 4.87e-01 | 100.0% | 97.5% |
| 4285716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 4.70e-01 | 89.6% | 84.0% |
| 5026606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 3.95e-01 | 85.4% | 80.0% |
| 4057537 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.55 | 38.0 | 2.92e-01 | 75.0% | 88.0% |
| 4553077 | 2.1.1.60 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N | 0.55 | 40.0 | 4.07e-01 | 89.6% | 84.4% |
| 5045419 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 39.0 | 3.64e-01 | 89.6% | 58.5% |