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JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00131
Bact-VirJBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00131
Identity
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-124
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 38.0 | 4.30e-01 | 100.0% | 73.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 34.0 | 3.88e-01 | 99.0% | 74.2% |
| 1sjdB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.76e-01 | 83.3% | 100.0% |
| 1kqrA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 36.0 | 3.06e-01 | 84.4% | 41.2% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 41.0 | 3.57e-01 | 83.3% | 95.4% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.49e-01 | 83.3% | 83.1% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 30.0 | 3.28e-01 | 82.3% | 73.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 29.0 | 3.73e-01 | 89.6% | 88.9% |
| 3785535 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 48.0 | 4.43e-01 | 93.8% | 98.5% |
| 4175825 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.58 | 35.0 | 4.27e-01 | 81.2% | 92.3% |
| 5059882 | 2484.1.1.177 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2779 | 0.56 | 40.0 | 3.19e-01 | 76.0% | 89.5% |
| 3931897 | 69.1.2.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › AXH › AXH | 0.55 | 44.0 | 4.06e-01 | 86.5% | 68.8% |
| 3904569 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 47.0 | 4.31e-01 | 95.8% | 91.2% |
| 5061189 | 2.16.1.1 ↗ | beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL | 0.54 | 40.0 | 4.13e-01 | 99.0% | 84.4% |
| 5021624 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.53 | 41.0 | 2.73e-01 | 83.3% | 88.3% |
| 3960510 | 3844.2.1.0 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone | 0.53 | 42.0 | 3.02e-01 | 85.4% | 81.8% |
| 3632911 | 243.3.1.49 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Saf4_Yju2 | 0.53 | 33.0 | 3.48e-01 | 96.9% | 70.6% |
| 3693121 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 34.0 | 3.30e-01 | 94.8% | 58.2% |
| 3614237 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.52 | 47.0 | 4.17e-01 | 100.0% | 87.5% |