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JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00140
Bact-VirJBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00140
Identity
- Kingdom:
- phage
Quality
72.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-62
D2
medium
residues 69-116
Domain cluster:
rep: MF668275.1__ASZ73372.1__SEA_LUCKYBARNES_55__00055__D7-53
CATH (98)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.91 | 86.0 | 7.99e-01 | 100.0% | 86.0% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.89 | 71.0 | 7.26e-01 | 100.0% | 89.1% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.87 | 80.0 | 7.66e-01 | 100.0% | 98.1% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 73.0 | 6.42e-01 | 100.0% | 63.8% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 78.0 | 7.39e-01 | 100.0% | 89.5% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 77.0 | 6.75e-01 | 100.0% | 69.1% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.86 | 76.0 | 6.77e-01 | 100.0% | 98.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 78.0 | 7.08e-01 | 100.0% | 79.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.85 | 72.0 | 7.26e-01 | 100.0% | 91.7% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 74.0 | 6.57e-01 | 100.0% | 69.7% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 74.0 | 6.21e-01 | 100.0% | 70.4% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 74.0 | 6.85e-01 | 100.0% | 95.0% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 74.0 | 6.67e-01 | 100.0% | 92.4% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 73.0 | 6.57e-01 | 100.0% | 91.0% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 71.0 | 7.24e-01 | 95.8% | 100.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 76.0 | 6.88e-01 | 100.0% | 83.9% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 73.0 | 6.38e-01 | 100.0% | 69.0% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 73.0 | 6.44e-01 | 100.0% | 80.0% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 68.0 | 6.48e-01 | 100.0% | 78.6% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 72.0 | 6.31e-01 | 100.0% | 68.1% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 72.0 | 6.71e-01 | 100.0% | 95.0% |
| 1s1nA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 71.0 | 6.63e-01 | 100.0% | 91.7% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 73.0 | 7.30e-01 | 100.0% | 98.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 71.0 | 6.05e-01 | 100.0% | 71.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 71.0 | 6.59e-01 | 97.9% | 79.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 72.0 | 6.57e-01 | 100.0% | 79.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.79 | 70.0 | 6.39e-01 | 100.0% | 88.9% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 70.0 | 6.55e-01 | 100.0% | 81.4% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 71.0 | 6.23e-01 | 100.0% | 72.9% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 68.0 | 6.46e-01 | 100.0% | 82.1% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 69.0 | 5.98e-01 | 100.0% | 75.7% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 66.0 | 5.55e-01 | 100.0% | 62.8% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 67.0 | 6.03e-01 | 100.0% | 86.6% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 64.0 | 6.26e-01 | 100.0% | 84.9% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 66.0 | 6.09e-01 | 100.0% | 92.2% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 66.0 | 6.48e-01 | 100.0% | 96.2% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 67.0 | 6.04e-01 | 100.0% | 84.8% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 64.0 | 5.65e-01 | 100.0% | 82.7% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 63.0 | 5.70e-01 | 100.0% | 88.6% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.74 | 63.0 | 5.52e-01 | 100.0% | 86.8% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 61.0 | 5.40e-01 | 89.6% | 92.5% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 62.0 | 5.46e-01 | 100.0% | 74.3% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 49.0 | 4.31e-01 | 70.8% | 87.8% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.73 | 61.0 | 5.39e-01 | 100.0% | 81.6% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 61.0 | 5.52e-01 | 100.0% | 89.7% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 61.0 | 5.25e-01 | 100.0% | 70.0% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 50.0 | 4.37e-01 | 75.0% | 57.5% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 63.0 | 5.42e-01 | 97.9% | 68.5% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 49.0 | 4.33e-01 | 75.0% | 86.5% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.70 | 61.0 | 5.50e-01 | 100.0% | 77.3% |
| 2haxA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 47.0 | 4.87e-01 | 70.8% | 79.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 59.0 | 5.17e-01 | 100.0% | 68.8% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 51.0 | 4.73e-01 | 83.3% | 72.7% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.69 | 59.0 | 5.19e-01 | 100.0% | 89.2% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 58.0 | 5.58e-01 | 100.0% | 85.5% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 58.0 | 5.41e-01 | 100.0% | 77.4% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.68 | 46.0 | 4.55e-01 | 70.8% | 100.0% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 55.0 | 4.66e-01 | 89.6% | 83.7% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.68 | 51.0 | 4.44e-01 | 81.2% | 53.4% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.56e-01 | 100.0% | 87.3% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.67 | 60.0 | 4.34e-01 | 100.0% | 41.7% |
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 52.0 | 4.73e-01 | 85.4% | 95.4% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 55.0 | 5.29e-01 | 100.0% | 81.0% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.66 | 58.0 | 3.78e-01 | 100.0% | 47.1% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 55.0 | 4.11e-01 | 100.0% | 37.9% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 54.0 | 3.32e-01 | 95.8% | 42.6% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 54.0 | 4.03e-01 | 100.0% | 36.6% |
| 1a0rB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 52.0 | 3.16e-01 | 93.8% | 21.2% |
| 2vouB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 51.0 | 3.31e-01 | 93.8% | 52.5% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 55.0 | 4.52e-01 | 100.0% | 79.3% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 56.0 | 4.30e-01 | 100.0% | 95.2% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.39e-01 | 100.0% | 53.8% |
| 8c0zE01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 3.92e-01 | 100.0% | 93.9% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 3.58e-01 | 95.8% | 39.9% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 49.0 | 3.43e-01 | 93.8% | 61.0% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 51.0 | 3.20e-01 | 100.0% | 16.6% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 48.0 | 3.43e-01 | 93.8% | 45.2% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 46.0 | 3.71e-01 | 89.6% | 83.6% |
| 6rjiA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.12e-01 | 81.2% | 67.3% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.85e-01 | 95.8% | 58.3% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 54.0 | 3.52e-01 | 100.0% | 49.8% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 49.0 | 3.85e-01 | 100.0% | 97.4% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.59 | 48.0 | 3.96e-01 | 97.9% | 89.7% |
| 2x8nA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.59 | 39.0 | 3.24e-01 | 70.8% | 57.7% |
| 2q0lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 47.0 | 3.24e-01 | 95.8% | 55.6% |
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 50.0 | 3.42e-01 | 97.9% | 63.5% |
| 5nahA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 2.96e-01 | 100.0% | 41.5% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 46.0 | 3.69e-01 | 100.0% | 96.5% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 46.0 | 2.76e-01 | 95.8% | 98.5% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.92e-01 | 95.8% | 51.4% |
| 3oyyB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 4.06e-01 | 83.3% | 70.7% |
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 48.0 | 2.92e-01 | 100.0% | 41.6% |
| 3luuA00 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.55 | 45.0 | 3.82e-01 | 97.9% | 85.4% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.55 | 41.0 | 3.01e-01 | 89.6% | 57.7% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 46.0 | 3.04e-01 | 100.0% | 60.7% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 43.0 | 3.30e-01 | 93.8% | 51.2% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.32e-01 | 87.5% | 97.1% |
| 4a9wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 38.0 | 2.46e-01 | 95.8% | 36.4% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.92 | 74.0 | 7.03e-01 | 100.0% | 74.5% |
| 3486496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.91 | 81.0 | 7.70e-01 | 100.0% | 83.6% |
| 3476178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.91 | 85.0 | 6.12e-01 | 100.0% | 41.7% |
| 3475462 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.91 | 84.0 | 6.78e-01 | 100.0% | 58.8% |
| 3419491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.91 | 85.0 | 7.74e-01 | 100.0% | 85.0% |
| 3785385 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 75.0 | 5.94e-01 | 100.0% | 47.8% |
| 4177510 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.90 | 79.0 | 5.69e-01 | 100.0% | 36.8% |
| 4998870 | 4.1.1.483 ↗ | beta barrels › SH3 › SH3 › SH3 › RRXRR | 0.89 | 71.0 | 5.75e-01 | 100.0% | 48.2% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.88 | 73.0 | 6.97e-01 | 100.0% | 78.2% |
| 4932609 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 82.0 | 7.28e-01 | 100.0% | 75.4% |
| 4091533 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.88 | 79.0 | 6.89e-01 | 100.0% | 91.4% |
| 3243188 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.87 | 81.0 | 6.81e-01 | 100.0% | 82.7% |
| 3533770 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.87 | 77.0 | 5.82e-01 | 100.0% | 43.8% |
| 3850775 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.87 | 76.0 | 6.83e-01 | 100.0% | 70.8% |
| 3558188 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.86 | 76.0 | 6.46e-01 | 100.0% | 61.3% |
| 3475240 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.86 | 80.0 | 7.56e-01 | 97.9% | 89.1% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.86 | 78.0 | 6.67e-01 | 100.0% | 74.7% |
| 3022070 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.86 | 78.0 | 5.79e-01 | 100.0% | 68.4% |
| 145285 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.86 | 77.0 | 6.83e-01 | 100.0% | 71.2% |
| 3264883 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.85 | 79.0 | 7.50e-01 | 100.0% | 87.3% |
| 3300074 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 77.0 | 7.35e-01 | 100.0% | 87.0% |
| 3584571 | 4.1.1.56 ↗ | beta barrels › SH3 › SH3 › SH3 › RBB1NT | 0.85 | 74.0 | 4.59e-01 | 100.0% | 19.1% |
| 1145920 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.85 | 71.0 | 5.85e-01 | 100.0% | 53.0% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.84 | 76.0 | 7.04e-01 | 100.0% | 93.3% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 74.0 | 6.56e-01 | 100.0% | 69.2% |
| 3546309 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.84 | 75.0 | 6.46e-01 | 100.0% | 74.7% |
| 3484007 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 76.0 | 6.63e-01 | 100.0% | 80.0% |
| 3818428 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.84 | 77.0 | 6.51e-01 | 100.0% | 65.3% |
| 3936885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 75.0 | 6.74e-01 | 97.9% | 73.8% |
| 3173941 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 75.0 | 5.76e-01 | 100.0% | 47.0% |
| 532 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.83 | 74.0 | 5.87e-01 | 100.0% | 64.6% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.83 | 75.0 | 6.02e-01 | 100.0% | 53.3% |
| 3421158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 76.0 | 7.00e-01 | 100.0% | 81.7% |
| 3406663 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.83 | 67.0 | 6.62e-01 | 87.5% | 100.0% |
| 4003015 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.83 | 74.0 | 6.96e-01 | 100.0% | 93.2% |
| 3915732 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.83 | 74.0 | 6.09e-01 | 100.0% | 65.9% |
| 3706786 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 77.0 | 6.51e-01 | 100.0% | 64.0% |
| 3609527 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.83 | 68.0 | 4.37e-01 | 93.8% | 20.5% |
| 3668711 | 109.4.1.916 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B | 0.83 | 54.0 | 3.16e-01 | 83.3% | 9.4% |
| 3389432 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.83 | 75.0 | 6.37e-01 | 100.0% | 76.0% |
| 3497365 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.83 | 76.0 | 7.27e-01 | 100.0% | 92.7% |
| 3368254 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.83 | 75.0 | 7.20e-01 | 100.0% | 89.1% |
| 3329059 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.83 | 75.0 | 7.46e-01 | 100.0% | 96.0% |
| 3834303 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.82 | 75.0 | 4.24e-01 | 100.0% | 10.8% |
| 3737903 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.82 | 69.0 | 6.60e-01 | 97.9% | 81.8% |
| 3423337 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.82 | 74.0 | 6.20e-01 | 100.0% | 61.3% |
| 3676844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 74.0 | 6.33e-01 | 100.0% | 65.3% |
| 3725260 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.82 | 72.0 | 6.33e-01 | 97.9% | 78.6% |
| 3626277 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.82 | 72.0 | 5.74e-01 | 100.0% | 66.3% |
| 3450200 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 74.0 | 6.03e-01 | 100.0% | 57.6% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.82 | 76.0 | 6.38e-01 | 100.0% | 64.0% |
| 3834390 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 73.0 | 7.22e-01 | 97.9% | 94.0% |
| 3929260 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 75.0 | 7.16e-01 | 100.0% | 87.3% |
| 3824346 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 74.0 | 6.15e-01 | 100.0% | 61.3% |
| 3342430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 74.0 | 6.28e-01 | 100.0% | 65.3% |
| 3213114 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.81 | 71.0 | 5.80e-01 | 100.0% | 71.1% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.81 | 74.0 | 6.86e-01 | 100.0% | 81.4% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.81 | 70.0 | 6.22e-01 | 97.9% | 78.6% |
| 2849853 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.81 | 71.0 | 6.38e-01 | 100.0% | 86.6% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 73.0 | 6.25e-01 | 100.0% | 66.7% |
| 3317030 | 4.1.1.366 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26738 | 0.81 | 73.0 | 6.79e-01 | 100.0% | 81.7% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.81 | 71.0 | 6.30e-01 | 100.0% | 81.4% |
| 4680114 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.81 | 72.0 | 6.16e-01 | 100.0% | 74.7% |
| 3531894 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.80 | 70.0 | 6.36e-01 | 100.0% | 95.4% |
| 3529708 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.80 | 71.0 | 6.11e-01 | 100.0% | 74.7% |
| 3864347 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.80 | 70.0 | 6.37e-01 | 100.0% | 95.4% |
| 3575865 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.80 | 72.0 | 6.30e-01 | 100.0% | 71.4% |
| 3270324 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.80 | 72.0 | 7.10e-01 | 100.0% | 94.0% |
| 3855038 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.80 | 72.0 | 4.92e-01 | 100.0% | 30.0% |
| 3672445 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 72.0 | 5.03e-01 | 100.0% | 33.8% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.80 | 72.0 | 5.88e-01 | 100.0% | 56.5% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.79 | 72.0 | 4.74e-01 | 100.0% | 30.6% |
| 4028871 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.79 | 63.0 | 5.37e-01 | 85.4% | 84.9% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.79 | 71.0 | 6.60e-01 | 100.0% | 85.0% |
| 4998113 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.79 | 66.0 | 6.78e-01 | 97.9% | 100.0% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 71.0 | 6.36e-01 | 100.0% | 86.2% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.77 | 70.0 | 6.45e-01 | 100.0% | 85.0% |
| 3495652 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 4.66e-01 | 100.0% | 35.0% |
| 4213135 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.76 | 67.0 | 4.97e-01 | 100.0% | 45.2% |
| 3511278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 65.0 | 5.74e-01 | 100.0% | 65.7% |
| 3616007 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.76 | 69.0 | 6.56e-01 | 100.0% | 87.3% |
| 1031172 | 4.1.1.113 ↗ | beta barrels › SH3 › SH3 › SH3 › TraI_2B | 0.75 | 68.0 | 5.91e-01 | 100.0% | 70.8% |
| 3301383 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.75 | 65.0 | 6.44e-01 | 97.9% | 90.0% |
| 2664854 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.75 | 65.0 | 5.12e-01 | 100.0% | 54.9% |
| 4302391 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.75 | 64.0 | 5.82e-01 | 97.9% | 84.6% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.75 | 64.0 | 5.83e-01 | 100.0% | 72.3% |
| 2641775 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.74 | 64.0 | 4.70e-01 | 100.0% | 41.8% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.74 | 68.0 | 5.75e-01 | 100.0% | 65.3% |
| 3300051 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.74 | 66.0 | 5.65e-01 | 100.0% | 64.0% |
| 2700914 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.73 | 65.0 | 5.49e-01 | 100.0% | 60.0% |
| 1442407 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.73 | 63.0 | 4.27e-01 | 100.0% | 30.3% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.73 | 67.0 | 5.69e-01 | 100.0% | 66.7% |
| 2127495 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.73 | 64.0 | 4.41e-01 | 100.0% | 34.8% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 5.83e-01 | 100.0% | 83.3% |
| 4187800 | 4.1.1.39 ↗ | beta barrels › SH3 › SH3 › SH3 › SHD1 | 0.71 | 60.0 | 5.59e-01 | 97.9% | 75.0% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 62.0 | 5.83e-01 | 100.0% | 83.3% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.71 | 60.0 | 5.29e-01 | 100.0% | 70.7% |
| 3715297 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 50.0 | 4.06e-01 | 91.7% | 100.0% |
| 3880284 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.54 | 45.0 | 2.99e-01 | 97.9% | 75.6% |
D3
medium
residues 120-156
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.99 | 90.0 | 8.28e-01 | 97.3% | 78.3% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.98 | 81.0 | 6.44e-01 | 89.2% | 48.5% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.98 | 90.0 | 7.98e-01 | 100.0% | 72.5% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.97 | 90.0 | 6.14e-01 | 100.0% | 32.7% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.97 | 89.0 | 6.43e-01 | 100.0% | 40.2% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.96 | 88.0 | 5.87e-01 | 100.0% | 29.8% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.96 | 87.0 | 5.60e-01 | 100.0% | 24.8% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.96 | 87.0 | 7.67e-01 | 100.0% | 71.2% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.95 | 86.0 | 7.74e-01 | 100.0% | 74.0% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.95 | 85.0 | 5.71e-01 | 100.0% | 29.8% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.95 | 80.0 | 7.30e-01 | 94.6% | 72.3% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.94 | 83.0 | 5.77e-01 | 100.0% | 32.7% |
| 7e9uA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.93 | 83.0 | 4.58e-01 | 100.0% | 8.2% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.93 | 85.0 | 5.60e-01 | 100.0% | 27.6% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.93 | 84.0 | 5.09e-01 | 100.0% | 17.7% |
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.93 | 78.0 | 5.23e-01 | 91.9% | 28.6% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.91 | 79.0 | 6.10e-01 | 100.0% | 45.1% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.91 | 81.0 | 6.10e-01 | 100.0% | 44.2% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 79.0 | 5.26e-01 | 100.0% | 26.2% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.90 | 80.0 | 5.97e-01 | 100.0% | 42.5% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.90 | 79.0 | 6.18e-01 | 100.0% | 48.1% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.90 | 79.0 | 6.19e-01 | 100.0% | 48.7% |
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.89 | 76.0 | 5.04e-01 | 100.0% | 25.4% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.88 | 77.0 | 5.81e-01 | 100.0% | 42.5% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.88 | 75.0 | 4.95e-01 | 100.0% | 24.5% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.87 | 75.0 | 6.76e-01 | 100.0% | 69.8% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.87 | 70.0 | 7.04e-01 | 91.9% | 91.9% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 67.0 | 5.85e-01 | 94.6% | 85.5% |
| 2yfkA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.78 | 66.0 | 4.18e-01 | 100.0% | 39.3% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.74 | 54.0 | 4.84e-01 | 83.8% | 61.4% |
| 2f93B00 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 59.0 | 5.48e-01 | 100.0% | 78.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3310874 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.99 | 86.0 | 8.34e-01 | 91.9% | 85.0% |
| 3409005 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.99 | 93.0 | 7.64e-01 | 100.0% | 61.7% |
| 3505349 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.99 | 83.0 | 8.07e-01 | 89.2% | 82.5% |
| 4930709 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.99 | 92.0 | 5.58e-01 | 100.0% | 19.0% |
| 3584539 | 192.17.1.6 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 | 0.98 | 91.0 | 6.99e-01 | 100.0% | 49.3% |
| None | — | 0.98 | 90.0 | 4.89e-01 | 100.0% | 7.2% | |
| 3383375 | 192.11.1.0 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB | 0.98 | 85.0 | 8.78e-01 | 94.6% | 100.0% |
| 5024994 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.98 | 90.0 | 6.03e-01 | 100.0% | 30.8% |
| 4432094 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.97 | 89.0 | 8.08e-01 | 100.0% | 77.1% |
| 3441654 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.97 | 89.0 | 5.01e-01 | 100.0% | 10.4% |
| 4419795 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.97 | 87.0 | 8.45e-01 | 97.3% | 90.0% |
| 4324075 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.96 | 87.0 | 7.95e-01 | 100.0% | 77.1% |
| 4642864 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.96 | 87.0 | 7.82e-01 | 100.0% | 74.0% |
| 4832459 | 3291.1.1.54 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CC2D1A-B_DM14 | 0.96 | 86.0 | 7.04e-01 | 100.0% | 56.9% |
| 5008490 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.95 | 85.0 | 6.31e-01 | 100.0% | 42.0% |
| 4165434 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.93 | 83.0 | 7.51e-01 | 100.0% | 74.0% |
| 4591721 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.91 | 79.0 | 4.65e-01 | 100.0% | 13.7% |
| 3943776 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.90 | 80.0 | 5.36e-01 | 100.0% | 28.5% |
| 3924201 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.90 | 81.0 | 6.65e-01 | 100.0% | 57.8% |
| 3419469 | 3444.2.1.0 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain | 0.90 | 76.0 | 6.69e-01 | 97.3% | 65.5% |
| 3552824 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.87 | 77.0 | 4.62e-01 | 97.3% | 16.4% |
| 3930556 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 73.0 | 5.12e-01 | 100.0% | 31.3% |
| 3227443 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.85 | 75.0 | 6.25e-01 | 100.0% | 57.8% |