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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00013
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00013
Identity
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 193-259
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 80.0 | 8.36e-01 | 91.0% | 100.0% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 80.0 | 8.24e-01 | 95.5% | 96.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 74.0 | 7.13e-01 | 89.6% | 76.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 67.0 | 6.25e-01 | 80.6% | 63.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 63.0 | 6.84e-01 | 71.6% | 94.8% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 64.0 | 6.45e-01 | 73.1% | 83.6% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 74.0 | 7.77e-01 | 85.1% | 98.4% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 83.0 | 7.81e-01 | 100.0% | 91.3% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 73.0 | 7.10e-01 | 86.6% | 79.2% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 71.0 | 7.32e-01 | 83.6% | 95.2% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 63.0 | 6.33e-01 | 73.1% | 83.6% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 67.0 | 6.58e-01 | 85.1% | 75.7% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.87 | 77.0 | 5.32e-01 | 95.5% | 31.1% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 64.0 | 6.79e-01 | 77.6% | 90.0% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 70.0 | 5.87e-01 | 85.1% | 54.3% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 63.0 | 6.48e-01 | 76.1% | 88.9% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.85 | 65.0 | 5.01e-01 | 80.6% | 39.7% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 68.0 | 6.58e-01 | 89.6% | 77.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 67.0 | 6.03e-01 | 88.1% | 64.4% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 68.0 | 6.91e-01 | 86.6% | 92.3% |
| 3hhgE01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 56.0 | 5.05e-01 | 73.1% | 53.4% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.81 | 71.0 | 5.62e-01 | 95.5% | 77.9% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 58.0 | 5.20e-01 | 74.6% | 56.2% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 55.0 | 5.93e-01 | 73.1% | 89.1% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.77 | 60.0 | 5.40e-01 | 85.1% | 62.8% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.77 | 57.0 | 4.68e-01 | 79.1% | 56.7% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 56.0 | 4.79e-01 | 80.6% | 68.9% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 5.33e-01 | 76.1% | 86.4% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.54e-01 | 71.6% | 75.0% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.70 | 48.0 | 3.70e-01 | 71.6% | 46.0% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 58.0 | 4.15e-01 | 92.5% | 88.4% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.72e-01 | 83.6% | 60.2% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.68 | 45.0 | 4.35e-01 | 92.5% | 60.5% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 40.0 | 4.96e-01 | 77.6% | 100.0% |
| 2gxgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 4.63e-01 | 100.0% | 81.4% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 54.0 | 3.64e-01 | 88.1% | 37.9% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.34e-01 | 77.6% | 58.5% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.83e-01 | 89.6% | 67.8% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.44e-01 | 82.1% | 61.3% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 53.0 | 4.41e-01 | 100.0% | 79.1% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 41.0 | 3.52e-01 | 82.1% | 43.1% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 43.0 | 3.95e-01 | 86.6% | 58.1% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 43.0 | 4.05e-01 | 76.1% | 91.5% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.55 | 46.0 | 3.92e-01 | 91.0% | 87.9% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 47.0 | 3.81e-01 | 98.5% | 82.0% |
| 3b81A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 41.0 | 3.04e-01 | 95.5% | 32.2% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.51 | 42.0 | 4.15e-01 | 89.6% | 88.9% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994220 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 1.00 | 68.0 | 7.24e-01 | 70.1% | 78.3% |
| 3279743 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.99 | 71.0 | 7.03e-01 | 77.6% | 71.4% |
| 4987929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.98 | 68.0 | 7.24e-01 | 71.6% | 81.7% |
| 4988284 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.98 | 70.0 | 7.73e-01 | 73.1% | 90.9% |
| 3090474 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.98 | 68.0 | 5.14e-01 | 71.6% | 34.8% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.97 | 64.0 | 7.51e-01 | 71.6% | 92.0% |
| 4279016 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.96 | 92.0 | 8.54e-01 | 100.0% | 85.0% |
| 4578719 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.96 | 72.0 | 7.51e-01 | 77.6% | 82.5% |
| 3974013 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.96 | 68.0 | 7.26e-01 | 73.1% | 81.7% |
| 3280235 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.95 | 67.0 | 6.42e-01 | 73.1% | 65.3% |
| 3969325 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.94 | 88.0 | 8.66e-01 | 98.5% | 95.7% |
| 138024 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.94 | 68.0 | 6.80e-01 | 74.6% | 73.5% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.94 | 88.0 | 8.44e-01 | 100.0% | 90.7% |
| 3288310 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 69.0 | 6.77e-01 | 79.1% | 72.9% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 87.0 | 7.96e-01 | 100.0% | 80.0% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.93 | 80.0 | 8.17e-01 | 91.0% | 95.4% |
| 3286659 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 70.0 | 6.88e-01 | 80.6% | 74.3% |
| 4131887 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 76.0 | 7.10e-01 | 88.1% | 72.2% |
| 3281471 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 76.0 | 7.12e-01 | 86.6% | 73.8% |
| 3972270 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.92 | 70.0 | 6.89e-01 | 79.1% | 75.7% |
| 4603338 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.92 | 86.0 | 8.47e-01 | 100.0% | 97.1% |
| 2330636 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 70.0 | 7.78e-01 | 79.1% | 100.0% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 62.0 | 6.81e-01 | 70.1% | 85.5% |
| 3282225 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 85.0 | 7.94e-01 | 100.0% | 85.0% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.91 | 85.0 | 5.60e-01 | 100.0% | 28.3% |
| 3969657 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 71.0 | 6.76e-01 | 85.1% | 72.0% |
| 3975610 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 62.0 | 6.12e-01 | 73.1% | 67.1% |
| 4492035 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.91 | 67.0 | 6.59e-01 | 83.6% | 72.9% |
| 3971990 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 77.0 | 7.03e-01 | 91.0% | 70.6% |
| 3282538 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 67.0 | 6.52e-01 | 79.1% | 71.2% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 83.0 | 7.58e-01 | 100.0% | 87.1% |
| 3978496 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 66.0 | 6.50e-01 | 76.1% | 72.9% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 68.0 | 6.54e-01 | 79.1% | 86.7% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.89 | 74.0 | 7.78e-01 | 86.6% | 98.3% |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 82.0 | 8.11e-01 | 100.0% | 97.1% |
| 4396640 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 72.0 | 5.77e-01 | 85.1% | 48.3% |
| 3288090 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 80.0 | 7.86e-01 | 97.0% | 91.4% |
| 3955987 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.89 | 71.0 | 6.24e-01 | 85.1% | 61.1% |
| 3961841 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 79.0 | 7.81e-01 | 94.0% | 90.0% |
| 4388780 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.89 | 83.0 | 6.27e-01 | 100.0% | 46.9% |
| 4395758 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 70.0 | 6.55e-01 | 83.6% | 70.0% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 81.0 | 5.28e-01 | 97.0% | 26.4% |
| 3163613 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 75.0 | 7.41e-01 | 91.0% | 92.9% |
| 3286174 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 71.0 | 6.76e-01 | 92.5% | 74.7% |
| 4159688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.88 | 64.0 | 6.37e-01 | 76.1% | 72.9% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.88 | 81.0 | 6.00e-01 | 97.0% | 43.3% |
| 4008147 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 62.0 | 6.36e-01 | 79.1% | 75.4% |
| 3279596 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 71.0 | 4.99e-01 | 86.6% | 30.5% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 79.0 | 5.16e-01 | 97.0% | 26.0% |
| 4205790 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 77.0 | 7.25e-01 | 95.5% | 80.0% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.87 | 81.0 | 7.57e-01 | 100.0% | 83.7% |
| 3977260 | 101.1.1.39 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Phage_antitermQ | 0.86 | 74.0 | 5.94e-01 | 91.0% | 53.3% |
| 4303963 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 73.0 | 7.05e-01 | 91.0% | 81.3% |
| 4663875 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.86 | 78.0 | 5.12e-01 | 95.5% | 26.7% |
| 3980681 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 66.0 | 6.11e-01 | 79.1% | 80.0% |
| 5041148 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 73.0 | 7.20e-01 | 89.6% | 85.7% |
| 4030763 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 65.0 | 6.61e-01 | 77.6% | 89.2% |
| 3968151 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 72.0 | 6.55e-01 | 94.0% | 69.4% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.86 | 78.0 | 5.09e-01 | 95.5% | 26.1% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 69.0 | 6.91e-01 | 85.1% | 83.8% |
| 3291721 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.86 | 59.0 | 5.08e-01 | 73.1% | 48.0% |
| 4034200 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.85 | 75.0 | 7.63e-01 | 95.5% | 95.4% |
| None | — | 0.85 | 77.0 | 5.05e-01 | 95.5% | 26.1% | |
| 4439853 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.85 | 74.0 | 7.34e-01 | 95.5% | 90.0% |
| 3962552 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.85 | 68.0 | 6.50e-01 | 85.1% | 74.7% |
| 4962234 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.84 | 66.0 | 6.37e-01 | 83.6% | 85.3% |
| 2332937 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 67.0 | 6.47e-01 | 85.1% | 77.0% |
| 4007717 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 67.0 | 6.26e-01 | 83.6% | 70.0% |
| 5039663 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 7.02e-01 | 94.0% | 84.0% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 70.0 | 6.04e-01 | 89.6% | 61.0% |
| 4551350 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 72.0 | 6.35e-01 | 94.0% | 66.3% |
| 3979166 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 65.0 | 6.47e-01 | 82.1% | 78.6% |
| 4237551 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 74.0 | 6.50e-01 | 95.5% | 68.4% |
| 4289285 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 73.0 | 6.55e-01 | 97.0% | 71.1% |
| 4031363 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 76.0 | 7.72e-01 | 98.5% | 100.0% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 76.0 | 7.30e-01 | 100.0% | 88.0% |
| 3283074 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 71.0 | 6.46e-01 | 91.0% | 71.8% |
| 3959929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.82 | 72.0 | 6.80e-01 | 95.5% | 81.2% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.81 | 71.0 | 6.69e-01 | 95.5% | 80.0% |
| 3288236 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.81 | 70.0 | 6.28e-01 | 94.0% | 68.9% |
| 4146353 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.81 | 76.0 | 7.07e-01 | 100.0% | 83.7% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 70.0 | 4.99e-01 | 95.5% | 34.4% |
| 3289143 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 71.0 | 6.50e-01 | 94.0% | 80.0% |
| 4470400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 66.0 | 6.49e-01 | 89.6% | 82.9% |
| 3280686 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.80 | 65.0 | 5.62e-01 | 86.6% | 65.0% |
| 3286340 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.80 | 64.0 | 5.69e-01 | 85.1% | 68.8% |
| 4214308 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.79 | 66.0 | 6.13e-01 | 91.0% | 72.9% |
| 3987666 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.79 | 65.0 | 6.06e-01 | 94.0% | 71.8% |
| 3982095 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.79 | 67.0 | 5.88e-01 | 92.5% | 65.3% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.78 | 69.0 | 5.99e-01 | 97.0% | 68.0% |
| 3286796 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.78 | 62.0 | 5.49e-01 | 85.1% | 65.3% |
| 4937081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 64.0 | 6.58e-01 | 91.0% | 90.8% |
| 3976506 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.77 | 58.0 | 5.60e-01 | 80.6% | 76.0% |
| 3961604 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.76 | 69.0 | 5.99e-01 | 100.0% | 69.0% |
| 4661582 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.76 | 71.0 | 5.87e-01 | 100.0% | 66.4% |
| 4458444 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.75 | 66.0 | 5.89e-01 | 97.0% | 71.6% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 55.0 | 5.83e-01 | 83.6% | 86.7% |
| 4588620 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.73 | 61.0 | 5.52e-01 | 91.0% | 71.1% |
D2
medium
residues 4-84
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.86 | 51.0 | 4.90e-01 | 100.0% | 52.7% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.86 | 43.0 | 4.37e-01 | 100.0% | 50.0% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.84 | 52.0 | 4.67e-01 | 100.0% | 47.7% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.82 | 52.0 | 5.09e-01 | 100.0% | 60.5% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.82 | 41.0 | 4.28e-01 | 100.0% | 52.7% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.78 | 48.0 | 3.91e-01 | 100.0% | 35.0% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 54.0 | 4.04e-01 | 100.0% | 32.6% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 54.0 | 6.00e-01 | 100.0% | 95.3% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 51.0 | 4.56e-01 | 100.0% | 53.6% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.71 | 65.0 | 5.63e-01 | 100.0% | 93.3% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.71 | 54.0 | 5.44e-01 | 100.0% | 80.0% |
| 2ieqA00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 47.0 | 4.61e-01 | 100.0% | 64.8% |
| 8hk0C01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.68 | 62.0 | 5.00e-01 | 100.0% | 90.0% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.68 | 53.0 | 5.23e-01 | 100.0% | 77.0% |
| 2xzeB00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 37.0 | 3.16e-01 | 100.0% | 31.2% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.66 | 59.0 | 4.96e-01 | 100.0% | 93.5% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 57.0 | 4.73e-01 | 98.8% | 70.0% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.66 | 53.0 | 4.67e-01 | 100.0% | 60.3% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.65 | 38.0 | 3.92e-01 | 100.0% | 58.2% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 51.0 | 5.55e-01 | 100.0% | 100.0% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.64 | 43.0 | 4.29e-01 | 100.0% | 67.1% |
| 4x28C03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 48.0 | 3.95e-01 | 100.0% | 44.8% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 57.0 | 4.59e-01 | 100.0% | 62.7% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 57.0 | 4.50e-01 | 100.0% | 88.3% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 47.0 | 4.22e-01 | 100.0% | 56.2% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 53.0 | 5.32e-01 | 100.0% | 86.6% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 53.0 | 5.48e-01 | 100.0% | 94.7% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.63 | 41.0 | 3.97e-01 | 93.8% | 58.4% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.63 | 43.0 | 3.46e-01 | 100.0% | 36.9% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 58.0 | 4.62e-01 | 100.0% | 61.8% |
| 5zw7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.63 | 54.0 | 4.50e-01 | 100.0% | 86.8% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.62 | 57.0 | 4.29e-01 | 100.0% | 89.6% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 43.0 | 4.31e-01 | 71.6% | 96.3% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 38.0 | 4.26e-01 | 96.3% | 78.5% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.62 | 52.0 | 5.08e-01 | 100.0% | 82.2% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.61 | 42.0 | 3.69e-01 | 97.5% | 47.2% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.61 | 46.0 | 3.76e-01 | 100.0% | 42.6% |
| 2xheA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.61 | 54.0 | 4.70e-01 | 98.8% | 99.2% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 44.0 | 4.82e-01 | 100.0% | 95.5% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.60 | 51.0 | 3.97e-01 | 100.0% | 79.2% |
| 8hk0B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 52.0 | 4.45e-01 | 100.0% | 92.0% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 42.0 | 3.72e-01 | 100.0% | 48.8% |
| 3au3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 43.0 | 2.93e-01 | 100.0% | 20.9% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.59 | 51.0 | 4.65e-01 | 100.0% | 93.9% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.59 | 40.0 | 3.08e-01 | 71.6% | 96.9% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.59 | 55.0 | 5.11e-01 | 100.0% | 81.0% |
| 3zbhA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 53.0 | 5.13e-01 | 96.3% | 86.7% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 54.0 | 3.78e-01 | 100.0% | 37.7% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 45.0 | 4.11e-01 | 100.0% | 63.6% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 51.0 | 4.14e-01 | 100.0% | 81.5% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 40.0 | 3.98e-01 | 71.6% | 95.2% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 51.0 | 4.80e-01 | 100.0% | 81.2% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 53.0 | 5.29e-01 | 96.3% | 95.1% |
| 4lwsB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 48.0 | 4.69e-01 | 100.0% | 84.1% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 49.0 | 4.30e-01 | 100.0% | 62.8% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 53.0 | 5.28e-01 | 100.0% | 96.5% |
| 4gr2A00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.56 | 43.0 | 3.95e-01 | 84.0% | 70.0% |
| 3cqcA00 | 1.20.190.50 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.55 | 51.0 | 3.53e-01 | 100.0% | 32.8% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 49.0 | 3.77e-01 | 100.0% | 51.9% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 36.0 | 3.76e-01 | 95.1% | 74.3% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.55 | 48.0 | 4.05e-01 | 100.0% | 67.1% |
| 4neoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.54 | 45.0 | 4.55e-01 | 95.1% | 96.4% |
| 6yttA01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.53 | 47.0 | 4.39e-01 | 100.0% | 78.0% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 47.0 | 3.88e-01 | 100.0% | 76.9% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 47.0 | 4.36e-01 | 100.0% | 78.6% |
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.51 | 35.0 | 3.38e-01 | 93.8% | 62.2% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 4.09e-01 | 81.5% | 92.8% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.51 | 42.0 | 4.16e-01 | 100.0% | 85.9% |
| 3khkB01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.51 | 41.0 | 3.42e-01 | 93.8% | 79.2% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.50 | 45.0 | 3.98e-01 | 98.8% | 79.5% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.50 | 44.0 | 3.69e-01 | 100.0% | 57.5% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.50 | 32.0 | 3.23e-01 | 95.1% | 63.4% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034285 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.81 | 50.0 | 4.00e-01 | 100.0% | 34.0% |
| 4371507 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.80 | 50.0 | 4.70e-01 | 100.0% | 53.7% |
| 3711237 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.79 | 52.0 | 5.31e-01 | 100.0% | 68.8% |
| 3596922 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 61.0 | 4.80e-01 | 100.0% | 43.0% |
| 3635187 | 109.62.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › Ebp1_C | 0.76 | 43.0 | 3.02e-01 | 100.0% | 18.4% |
| 4056158 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.74 | 50.0 | 4.47e-01 | 100.0% | 50.9% |
| 3731383 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.73 | 52.0 | 4.85e-01 | 100.0% | 60.0% |
| 4025757 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.73 | 67.0 | 4.81e-01 | 100.0% | 39.1% |
| 3784217 | 5054.1.1.12 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › NCA2 | 0.72 | 65.0 | 5.22e-01 | 100.0% | 63.2% |
| 3648998 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.72 | 45.0 | 4.35e-01 | 97.5% | 56.7% |
| 3355816 | 3922.1.1.170 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › BPS1 | 0.72 | 57.0 | 5.04e-01 | 100.0% | 60.9% |
| 3552608 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.72 | 47.0 | 3.85e-01 | 100.0% | 36.7% |
| 5002237 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.71 | 63.0 | 5.24e-01 | 100.0% | 57.0% |
| 4154170 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 45.0 | 3.77e-01 | 100.0% | 40.8% |
| 3687172 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.69 | 62.0 | 4.68e-01 | 100.0% | 78.9% |
| 3692081 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.68 | 61.0 | 4.99e-01 | 100.0% | 81.3% |
| 3967501 | 632.18.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › DUF4398 | 0.68 | 43.0 | 4.06e-01 | 100.0% | 53.7% |
| 3838087 | 3799.1.1.0 ↗ | alpha bundles › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain | 0.68 | 60.0 | 4.42e-01 | 100.0% | 94.1% |
| 4004067 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 47.0 | 4.65e-01 | 95.1% | 68.2% |
| 3579763 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 49.0 | 4.42e-01 | 100.0% | 57.3% |
| 3799135 | 633.15.1.0 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N | 0.66 | 59.0 | 4.84e-01 | 100.0% | 88.0% |
| 3470434 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.66 | 51.0 | 3.25e-01 | 100.0% | 18.1% |
| 4674043 | 632.11.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › UVR | 0.65 | 49.0 | 4.72e-01 | 100.0% | 71.1% |
| 3584048 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 40.0 | 3.94e-01 | 95.1% | 56.7% |
| 3756888 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.63 | 46.0 | 3.70e-01 | 77.8% | 79.4% |
| 3504312 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.63 | 44.0 | 4.17e-01 | 100.0% | 60.0% |
| 3218730 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 41.0 | 4.23e-01 | 98.8% | 72.0% |
| 3286912 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.62 | 42.0 | 4.00e-01 | 100.0% | 58.9% |
| 3280596 | 3324.1.1.0 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.62 | 57.0 | 4.96e-01 | 100.0% | 87.5% |
| 3437243 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.62 | 48.0 | 4.02e-01 | 100.0% | 49.6% |
| 5019240 | 3558.1.1.4 ↗ | alpha arrays › HSDR subunit helical domain › HSDR subunit helical domain › HSDR subunit helical domain › T1RH-like_C | 0.61 | 51.0 | 4.85e-01 | 93.8% | 76.8% |
| 4030279 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.61 | 54.0 | 3.60e-01 | 100.0% | 47.6% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 56.0 | 4.90e-01 | 100.0% | 69.3% |
| 3319283 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.60 | 53.0 | 4.38e-01 | 100.0% | 56.3% |
| 3812118 | 4207.1.1.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 | 0.60 | 51.0 | 4.26e-01 | 100.0% | 54.8% |
| 3607406 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.60 | 40.0 | 4.03e-01 | 92.6% | 68.8% |
| 3944917 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 52.0 | 3.67e-01 | 100.0% | 33.3% |
| 3615973 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 56.0 | 4.91e-01 | 100.0% | 71.3% |
| 5011384 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.60 | 45.0 | 3.26e-01 | 100.0% | 29.9% |
| 3867165 | 3871.1.1.0 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST | 0.59 | 42.0 | 3.47e-01 | 72.8% | 71.4% |
| 3277797 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.59 | 55.0 | 5.60e-01 | 98.8% | 98.8% |
| 3500243 | 1008.1.1.74 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CC_Cfap43 | 0.59 | 54.0 | 4.49e-01 | 100.0% | 57.9% |
| 5039649 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 55.0 | 4.77e-01 | 100.0% | 73.3% |
| 3272621 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 50.0 | 3.39e-01 | 93.8% | 36.3% |
| 3921243 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.59 | 55.0 | 3.14e-01 | 100.0% | 16.9% |
| 399541 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.58 | 53.0 | 4.97e-01 | 96.3% | 79.6% |
| 3201856 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.58 | 45.0 | 2.70e-01 | 81.5% | 21.2% |
| 981547 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.58 | 53.0 | 5.18e-01 | 96.3% | 89.7% |
| 5070059 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.58 | 53.0 | 3.68e-01 | 100.0% | 45.2% |
| 4268471 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.58 | 50.0 | 3.40e-01 | 100.0% | 26.2% |
| 3179763 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.57 | 52.0 | 3.89e-01 | 100.0% | 91.6% |
| 3584894 | 605.1.1.238 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › CNNM | 0.57 | 51.0 | 4.96e-01 | 100.0% | 87.8% |
| 3212939 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 45.0 | 3.68e-01 | 100.0% | 46.5% |
| 3280363 | 150.5.1.11 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › T7SS_ESX_EspC | 0.56 | 52.0 | 4.94e-01 | 98.8% | 86.3% |
| 3242640 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 48.0 | 3.86e-01 | 100.0% | 78.6% |
| 3213000 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.56 | 51.0 | 3.70e-01 | 100.0% | 50.7% |
| 4195555 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 49.0 | 3.83e-01 | 100.0% | 47.8% |
| 3717072 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 46.0 | 3.84e-01 | 100.0% | 52.4% |
| 4994917 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.55 | 46.0 | 3.25e-01 | 97.5% | 30.2% |
| 4630084 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.53 | 48.0 | 4.70e-01 | 100.0% | 91.1% |
| 3949830 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 46.0 | 4.13e-01 | 100.0% | 67.5% |
| 3496889 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.53 | 46.0 | 2.69e-01 | 100.0% | 26.1% |
| 3516645 | 301.6.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C | 0.53 | 48.0 | 3.50e-01 | 100.0% | 51.2% |
| 3197104 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.53 | 48.0 | 3.63e-01 | 100.0% | 54.6% |
| 3926759 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 45.0 | 3.09e-01 | 100.0% | 74.5% |
| 3633320 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.52 | 47.0 | 3.26e-01 | 100.0% | 30.7% |
| 3734275 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 43.0 | 2.44e-01 | 92.6% | 8.1% |
D3
medium
residues 85-152
Domain cluster:
rep: SRR1747065_scaffold_0_prodigal-single.1__X__X__00413__D3-67
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 73.0 | 6.40e-01 | 98.5% | 65.6% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.84 | 70.0 | 4.39e-01 | 95.6% | 18.8% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.83 | 73.0 | 4.62e-01 | 100.0% | 21.0% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.83 | 73.0 | 5.22e-01 | 100.0% | 35.5% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.79 | 71.0 | 6.69e-01 | 100.0% | 83.7% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.75 | 66.0 | 6.14e-01 | 100.0% | 78.8% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 51.0 | 3.27e-01 | 72.1% | 16.8% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 62.0 | 4.12e-01 | 98.5% | 88.2% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.67 | 56.0 | 4.78e-01 | 100.0% | 71.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.67 | 56.0 | 5.21e-01 | 100.0% | 87.9% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.66 | 49.0 | 3.48e-01 | 80.9% | 26.5% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.66 | 44.0 | 4.49e-01 | 75.0% | 70.6% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.65 | 47.0 | 3.04e-01 | 76.5% | 21.4% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.64 | 55.0 | 5.53e-01 | 100.0% | 95.5% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.64 | 51.0 | 3.97e-01 | 88.2% | 55.8% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 54.0 | 4.86e-01 | 97.1% | 79.2% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.63 | 54.0 | 4.79e-01 | 100.0% | 66.0% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.62 | 55.0 | 5.33e-01 | 100.0% | 100.0% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 44.0 | 4.03e-01 | 76.5% | 91.5% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.62 | 53.0 | 4.19e-01 | 97.1% | 67.6% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 51.0 | 4.78e-01 | 100.0% | 79.1% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 50.0 | 4.68e-01 | 94.1% | 77.0% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.60 | 50.0 | 3.18e-01 | 94.1% | 96.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 52.0 | 4.90e-01 | 100.0% | 80.0% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 46.0 | 3.42e-01 | 88.2% | 37.8% |
| 4akgA06 | 1.10.8.710 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain | 0.57 | 49.0 | 4.32e-01 | 100.0% | 69.2% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.57 | 48.0 | 4.05e-01 | 100.0% | 88.2% |
| 2k8oA00 | 1.20.5.2120 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 34.0 | 3.62e-01 | 85.3% | 68.3% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.56 | 39.0 | 3.80e-01 | 73.5% | 71.8% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 39.0 | 3.46e-01 | 73.5% | 74.8% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 47.0 | 3.18e-01 | 100.0% | 76.6% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 41.0 | 3.89e-01 | 82.4% | 78.2% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 45.0 | 4.38e-01 | 95.6% | 81.0% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 42.0 | 4.15e-01 | 95.6% | 80.0% |
| 1c5aA00 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.55 | 37.0 | 3.79e-01 | 100.0% | 73.8% |
| 3v53E00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.54 | 41.0 | 3.63e-01 | 82.4% | 96.1% |
| 6xasW01 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.54 | 37.0 | 4.10e-01 | 76.5% | 100.0% |
| 6wv5A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.54 | 38.0 | 3.11e-01 | 75.0% | 92.6% |
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 45.0 | 3.52e-01 | 94.1% | 44.9% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 44.0 | 3.94e-01 | 89.7% | 66.3% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 43.0 | 3.05e-01 | 94.1% | 36.1% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.52 | 38.0 | 3.63e-01 | 95.6% | 65.1% |
| 1kl9A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.52 | 42.0 | 3.94e-01 | 95.6% | 80.4% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.52 | 43.0 | 3.11e-01 | 100.0% | 34.5% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 42.0 | 4.09e-01 | 100.0% | 86.4% |
| 1ldjA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.51 | 36.0 | 3.02e-01 | 73.5% | 42.3% |
| 2raeA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 45.0 | 3.59e-01 | 98.5% | 96.4% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 42.0 | 3.97e-01 | 91.2% | 80.2% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 36.0 | 3.10e-01 | 76.5% | 48.7% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4570076 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 74.0 | 4.78e-01 | 100.0% | 22.9% |
| 4513974 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.85 | 74.0 | 6.01e-01 | 100.0% | 53.3% |
| 4631806 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.84 | 74.0 | 5.15e-01 | 100.0% | 32.0% |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 73.0 | 5.49e-01 | 100.0% | 40.5% |
| 4269761 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.84 | 74.0 | 5.21e-01 | 100.0% | 33.7% |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 73.0 | 4.63e-01 | 100.0% | 20.3% |
| 4624390 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.84 | 74.0 | 6.07e-01 | 100.0% | 55.7% |
| None | — | 0.84 | 73.0 | 5.56e-01 | 100.0% | 42.7% | |
| 3972284 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.84 | 73.0 | 5.99e-01 | 98.5% | 54.8% |
| 4053923 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 73.0 | 6.27e-01 | 100.0% | 61.0% |
| 3963570 | 142.1.1.2 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2,Sigma70_ner | 0.84 | 73.0 | 4.52e-01 | 100.0% | 17.8% |
| 4452096 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.84 | 73.0 | 5.16e-01 | 100.0% | 32.8% |
| 4322147 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 73.0 | 4.31e-01 | 100.0% | 13.2% |
| 4484001 | 142.1.1.4 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2,Sigma70_ner | 0.84 | 73.0 | 4.57e-01 | 100.0% | 19.1% |
| 4319899 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.84 | 73.0 | 4.70e-01 | 100.0% | 22.1% |
| 4225227 | 142.1.1.2 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2,Sigma70_ner | 0.84 | 73.0 | 4.51e-01 | 100.0% | 17.8% |
| 3090120 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.84 | 73.0 | 5.99e-01 | 100.0% | 54.2% |
| 3978386 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.84 | 73.0 | 4.53e-01 | 100.0% | 18.3% |
| 4274766 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 73.0 | 6.22e-01 | 100.0% | 61.0% |
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.84 | 73.0 | 5.04e-01 | 100.0% | 31.2% |
| 3676572 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.83 | 73.0 | 5.29e-01 | 100.0% | 36.6% |
| 4218058 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.83 | 73.0 | 4.57e-01 | 100.0% | 19.7% |
| 3828850 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.83 | 73.0 | 5.51e-01 | 100.0% | 42.7% |
| 3360961 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.82 | 71.0 | 5.20e-01 | 100.0% | 36.6% |
| 4258677 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.82 | 71.0 | 4.84e-01 | 100.0% | 28.4% |
| 140810 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.82 | 71.0 | 5.14e-01 | 100.0% | 35.8% |
| None | — | 0.82 | 71.0 | 4.86e-01 | 100.0% | 29.1% | |
| 3339567 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.82 | 74.0 | 5.33e-01 | 100.0% | 37.2% |
| 3299379 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 71.0 | 5.36e-01 | 100.0% | 42.7% |
| 3067828 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 69.0 | 6.64e-01 | 100.0% | 82.1% |
| None | — | 0.80 | 74.0 | 5.45e-01 | 100.0% | 41.2% | |
| 4349095 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.80 | 67.0 | 5.59e-01 | 97.1% | 53.9% |
| 4663875 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.77 | 67.0 | 4.55e-01 | 100.0% | 27.1% |
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 67.0 | 4.52e-01 | 100.0% | 26.5% |
| 4272325 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.77 | 65.0 | 4.58e-01 | 100.0% | 30.5% |
| 3971939 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.76 | 66.0 | 6.12e-01 | 97.1% | 76.5% |
| 3278088 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.76 | 63.0 | 5.37e-01 | 97.1% | 56.4% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.76 | 69.0 | 4.64e-01 | 100.0% | 48.8% |
| 4876272 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.76 | 66.0 | 5.88e-01 | 100.0% | 68.0% |
| 4852268 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.75 | 65.0 | 5.75e-01 | 100.0% | 67.3% |
| 4275108 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.74 | 65.0 | 6.22e-01 | 100.0% | 90.0% |
| 61904 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 65.0 | 5.99e-01 | 100.0% | 79.1% |
| 3973355 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 61.0 | 5.71e-01 | 100.0% | 75.3% |
| 3853901 | 310.2.1.20 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Codanin-1_C | 0.68 | 47.0 | 2.96e-01 | 73.5% | 13.7% |
| 3524385 | 3881.1.1.2 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › Codanin-1_C | 0.68 | 47.0 | 3.60e-01 | 73.5% | 31.2% |
| 3772061 | 109.4.1.809 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Codanin-1_C | 0.67 | 46.0 | 2.94e-01 | 73.5% | 13.9% |
| 3173336 | 1015.1.1.1 ↗ | alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › INSIG | 0.67 | 56.0 | 4.04e-01 | 95.6% | 32.0% |
| 3394467 | 142.3.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain | 0.67 | 57.0 | 5.29e-01 | 100.0% | 75.6% |
| 4943335 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.64 | 57.0 | 4.64e-01 | 100.0% | 67.7% |
| 3709879 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.63 | 53.0 | 5.24e-01 | 100.0% | 89.3% |
| 3593164 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.63 | 53.0 | 4.14e-01 | 100.0% | 66.7% |
| 5031367 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.63 | 54.0 | 3.95e-01 | 100.0% | 91.0% |
| 3730863 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.63 | 43.0 | 3.31e-01 | 72.1% | 56.9% |
| 3488020 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.62 | 52.0 | 3.86e-01 | 100.0% | 79.0% |
| 4996693 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 43.0 | 3.03e-01 | 73.5% | 84.1% |
| 5012876 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.60 | 49.0 | 3.54e-01 | 97.1% | 28.7% |
| 4203116 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.60 | 49.0 | 5.05e-01 | 98.5% | 100.0% |
| 4945955 | 181.1.1.32 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54 | 0.59 | 47.0 | 4.49e-01 | 100.0% | 74.1% |
| 2075033 | 3787.1.1.0 ↗ | alpha bundles › HAD superfamily helical bundle insertion domain | 0.59 | 46.0 | 4.42e-01 | 95.6% | 74.7% |
| 4953267 | 632.11.1.19 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF2096_N | 0.57 | 38.0 | 3.44e-01 | 70.6% | 91.0% |
| 3599587 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 47.0 | 3.59e-01 | 98.5% | 90.3% |
| 3997160 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.57 | 48.0 | 4.33e-01 | 100.0% | 76.0% |
| 3179273 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.57 | 46.0 | 3.14e-01 | 95.6% | 60.3% |
| 4144086 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.55 | 45.0 | 4.02e-01 | 92.6% | 64.0% |
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.54 | 37.0 | 3.37e-01 | 73.5% | 89.0% |
| 4231043 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 45.0 | 3.08e-01 | 94.1% | 26.5% |
| 3465983 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 48.0 | 3.78e-01 | 100.0% | 52.1% |
| 4037982 | 5076.2.1.7 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › UPF0259 | 0.52 | 45.0 | 3.15e-01 | 100.0% | 83.3% |
| 5069014 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.50 | 36.0 | 2.90e-01 | 76.5% | 79.3% |
| 4290083 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.50 | 38.0 | 3.01e-01 | 80.9% | 57.2% |