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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00102
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00102
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-93_107-133
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lvaA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 42.0 | 4.92e-01 | 70.0% | 93.3% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 46.0 | 4.99e-01 | 98.9% | 93.2% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 4.37e-01 | 70.0% | 77.8% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.90e-01 | 70.0% | 67.0% |
| 2v6eA04 | 1.10.10.2040 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 38.0 | 3.83e-01 | 70.0% | 69.9% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 29.0 | 3.77e-01 | 70.0% | 93.6% |
| 3cb6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 45.0 | 3.30e-01 | 100.0% | 91.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781962 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.74 | 48.0 | 5.55e-01 | 70.0% | 92.3% |
| 5029087 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 5.30e-01 | 75.6% | 93.8% |
| 3715642 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.69 | 43.0 | 4.62e-01 | 70.0% | 74.7% |
| 3481546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 46.0 | 5.29e-01 | 72.2% | 100.0% |
| 4660931 | 101.1.2.71 ↗ | alpha arrays › HTH › HTH › winged helix domain › RuvB_C | 0.66 | 48.0 | 4.98e-01 | 100.0% | 81.2% |
| 4895784 | 101.1.2.623 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25983 | 0.66 | 41.0 | 4.58e-01 | 70.0% | 83.6% |
| 4325661 | 101.1.2.71 ↗ | alpha arrays › HTH › HTH › winged helix domain › RuvB_C | 0.65 | 49.0 | 5.29e-01 | 100.0% | 94.7% |
| 4982716 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 57.0 | 5.37e-01 | 97.8% | 96.3% |
| 3995141 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.65 | 44.0 | 4.52e-01 | 70.0% | 94.1% |
| 5013996 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 43.0 | 4.67e-01 | 70.0% | 82.7% |
| 3600603 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.80e-01 | 77.8% | 100.0% |
| 5050345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 42.0 | 4.17e-01 | 70.0% | 64.2% |
| 3393539 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.63 | 44.0 | 4.78e-01 | 73.3% | 93.3% |
| 3960008 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.62 | 37.0 | 4.11e-01 | 94.4% | 75.7% |
| 5031727 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.59 | 47.0 | 4.68e-01 | 100.0% | 82.1% |
| 3605925 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 38.0 | 4.20e-01 | 70.0% | 87.1% |
| 3589269 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 31.0 | 3.23e-01 | 70.0% | 65.0% |
D2
medium
residues 94-106_134-173