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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00218
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00218
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-85
Domain cluster:
rep: MH382836.1__AXC36525.1__phCDa_81__00081__D4-78
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4abyD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 40.0 | 2.63e-01 | 88.0% | 13.5% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 45.0 | 3.64e-01 | 77.1% | 91.5% |
| 4upiA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.61 | 49.0 | 3.01e-01 | 86.7% | 59.9% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.56 | 40.0 | 3.36e-01 | 73.5% | 80.5% |
| 2fmlA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 38.0 | 3.06e-01 | 71.1% | 81.1% |
| 2yk0A03 | 1.20.58.1930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 43.0 | 3.13e-01 | 89.2% | 44.1% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.51 | 34.0 | 3.01e-01 | 83.1% | 47.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969727 | 897.2.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E | 0.63 | 53.0 | 4.27e-01 | 89.2% | 100.0% |
| 4537639 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.62 | 50.0 | 3.04e-01 | 85.5% | 30.5% |
| 3166727 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 42.0 | 3.61e-01 | 75.9% | 99.3% |
| 4110937 | 874.1.1.2 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › MukB_hinge | 0.59 | 43.0 | 3.37e-01 | 75.9% | 85.3% |
| 3409083 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.57 | 39.0 | 3.41e-01 | 72.3% | 74.1% |
| 3738978 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.43e-01 | 81.9% | 45.7% |
| 5081361 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 3.68e-01 | 72.3% | 66.0% |
| 3408236 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.55 | 50.0 | 4.30e-01 | 98.8% | 98.4% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.54 | 37.0 | 3.85e-01 | 71.1% | 87.5% |
| 3928500 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.44e-01 | 79.5% | 64.4% |
| 4030708 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.53 | 49.0 | 2.87e-01 | 100.0% | 76.1% |
| 3936550 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.50 | 43.0 | 2.60e-01 | 91.6% | 18.5% |