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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00228
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00228
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-209
Domain cluster:
rep: IMGVR_UViG_3300000928_002594-3300000928-OpTDRAFT_100169606__D4-180
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02540.24 best | NAD_synthase | 69.2 | 4.40e-19 | 92.7% | 65.3% |
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.95 | 84.0 | 7.79e-01 | 100.0% | 74.9% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.94 | 82.0 | 7.44e-01 | 100.0% | 70.7% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.89 | 84.0 | 7.50e-01 | 100.0% | 73.4% |
| 3n05A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.89 | 79.0 | 8.29e-01 | 95.6% | 98.9% |
| 2dplA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.87 | 68.0 | 7.59e-01 | 95.6% | 98.8% |
| 3ilvA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.87 | 81.0 | 6.72e-01 | 96.6% | 71.3% |
| 3sdbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 73.0 | 7.43e-01 | 96.6% | 91.0% |
| 2vxoA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 75.0 | 7.29e-01 | 100.0% | 97.7% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 62.0 | 6.68e-01 | 87.7% | 100.0% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 69.0 | 5.92e-01 | 99.0% | 66.1% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 65.0 | 6.25e-01 | 100.0% | 85.9% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 44.0 | 4.85e-01 | 84.8% | 75.6% |
| 2derB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 61.0 | 6.14e-01 | 90.7% | 96.6% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 38.0 | 4.57e-01 | 84.3% | 81.3% |
| 1zunA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 60.0 | 6.23e-01 | 97.1% | 99.0% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 61.0 | 5.55e-01 | 95.6% | 82.8% |
| 1m1zA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 61.0 | 5.43e-01 | 99.5% | 81.6% |
| 2fi1A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 38.0 | 4.64e-01 | 83.3% | 93.5% |
| 1npdB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 41.0 | 4.72e-01 | 85.8% | 88.6% |
| 4g1vA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.61 | 38.0 | 4.56e-01 | 82.8% | 93.4% |
| 7e52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 32.0 | 4.05e-01 | 94.1% | 83.6% |
| 3uw2A01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.60 | 36.0 | 4.10e-01 | 77.9% | 78.1% |
| 1up7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 35.0 | 4.23e-01 | 76.0% | 86.9% |
| 4gicA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.59 | 35.0 | 4.12e-01 | 77.0% | 82.6% |
| 4ncbA05 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 35.0 | 4.01e-01 | 87.7% | 78.9% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.58 | 47.0 | 4.23e-01 | 83.3% | 98.5% |
| 1qfjA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.58 | 37.0 | 4.48e-01 | 78.9% | 96.3% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 45.0 | 4.21e-01 | 81.4% | 100.0% |
| 4xsoA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 37.0 | 3.95e-01 | 81.4% | 73.0% |
| 2g8lA03 | 3.40.50.10880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF01937, DUF89, domain 3 | 0.56 | 39.0 | 4.44e-01 | 86.3% | 94.7% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 48.0 | 4.25e-01 | 90.2% | 95.5% |
| 2p11A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 36.0 | 4.23e-01 | 79.9% | 91.0% |
| 5l3sB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 4.68e-01 | 89.2% | 91.9% |
| 3r0xA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 42.0 | 3.59e-01 | 78.4% | 83.8% |
| 4c7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 4.64e-01 | 87.3% | 99.0% |
| 3tztA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 44.0 | 4.19e-01 | 82.8% | 100.0% |
| 4z0tA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 4.23e-01 | 86.3% | 87.3% |
| 5l3qA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 4.52e-01 | 86.8% | 92.7% |
| 2qq5A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 4.19e-01 | 85.3% | 87.0% |
| 3rkuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 4.09e-01 | 87.7% | 86.9% |
| 3pvzB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 4.05e-01 | 91.2% | 71.3% |
| 2bfwA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 36.0 | 3.81e-01 | 81.4% | 73.0% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 4.01e-01 | 80.4% | 91.5% |
| 3fi9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 37.0 | 4.35e-01 | 80.9% | 100.0% |
| 1pujA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 4.47e-01 | 87.7% | 100.0% |
| 1zkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 4.38e-01 | 86.8% | 91.9% |
| 1xg5B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 4.16e-01 | 88.2% | 90.2% |
| 1ceqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 35.0 | 4.17e-01 | 74.5% | 100.0% |
| 2o0mA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 3.98e-01 | 86.3% | 86.6% |
| 3rssA01 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.52 | 43.0 | 4.32e-01 | 90.2% | 85.3% |
| 3looB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 43.0 | 3.86e-01 | 87.3% | 97.1% |
| 2gn0B01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.85e-01 | 78.9% | 95.1% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.46e-01 | 89.7% | 92.3% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 3.96e-01 | 79.9% | 78.2% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 40.0 | 4.12e-01 | 79.4% | 97.9% |
| 2f8lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 4.04e-01 | 88.2% | 75.1% |
| 1tdjA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 3.76e-01 | 77.9% | 95.1% |
| 3qj4A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 36.0 | 4.08e-01 | 80.9% | 94.3% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 3.86e-01 | 78.9% | 87.7% |
| 2wk1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 41.0 | 3.91e-01 | 85.8% | 95.5% |
| 5uqiA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.50 | 35.0 | 3.65e-01 | 92.2% | 76.6% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 133894 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.95 | 84.0 | 7.90e-01 | 100.0% | 77.3% |
| 4664976 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 85.0 | 7.83e-01 | 100.0% | 75.5% |
| 4263013 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.95 | 85.0 | 7.54e-01 | 100.0% | 68.9% |
| None | — | 0.95 | 86.0 | 7.76e-01 | 100.0% | 72.7% | |
| None | — | 0.95 | 82.0 | 7.48e-01 | 100.0% | 71.0% | |
| 4648784 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.94 | 85.0 | 7.55e-01 | 100.0% | 69.6% |
| 4045263 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.94 | 86.0 | 7.93e-01 | 100.0% | 76.8% |
| 4386055 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.94 | 85.0 | 7.78e-01 | 100.0% | 74.5% |
| 4253395 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.94 | 86.0 | 7.89e-01 | 100.0% | 76.7% |
| 4395650 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.94 | 83.0 | 7.76e-01 | 99.0% | 76.5% |
| 4072992 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.94 | 84.0 | 7.36e-01 | 100.0% | 67.6% |
| None | — | 0.93 | 83.0 | 7.85e-01 | 99.5% | 79.1% | |
| None | — | 0.93 | 84.0 | 7.64e-01 | 100.0% | 73.7% | |
| 4644409 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.93 | 84.0 | 7.53e-01 | 100.0% | 71.5% |
| 4038581 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.93 | 87.0 | 7.62e-01 | 99.5% | 70.9% |
| 5022630 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.93 | 85.0 | 7.49e-01 | 100.0% | 69.7% |
| 3964181 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.92 | 86.0 | 7.75e-01 | 100.0% | 74.5% |
| 3717378 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.92 | 89.0 | 7.71e-01 | 100.0% | 70.8% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.91 | 85.0 | 7.54e-01 | 100.0% | 71.8% |
| 5048385 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.91 | 88.0 | 7.59e-01 | 100.0% | 71.5% |
| 4052372 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.90 | 83.0 | 7.47e-01 | 97.5% | 72.8% |
| 4432146 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.89 | 87.0 | 7.48e-01 | 100.0% | 70.7% |
| 4060776 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.89 | 86.0 | 7.60e-01 | 100.0% | 76.0% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.88 | 86.0 | 7.22e-01 | 100.0% | 77.7% |
| 4070508 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.87 | 84.0 | 7.36e-01 | 100.0% | 74.7% |
| 5021368 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.87 | 84.0 | 7.02e-01 | 100.0% | 75.3% |
| 4061833 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.87 | 84.0 | 7.28e-01 | 99.0% | 80.4% |
| 4483631 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.86 | 84.0 | 7.36e-01 | 100.0% | 80.4% |
| 4973517 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.86 | 70.0 | 7.60e-01 | 97.5% | 97.7% |
| 4981666 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.86 | 70.0 | 7.63e-01 | 99.0% | 100.0% |
| 4957756 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.86 | 83.0 | 6.91e-01 | 100.0% | 72.1% |
| 5040319 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.84 | 70.0 | 7.51e-01 | 97.1% | 98.9% |
| 5071227 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.84 | 82.0 | 6.96e-01 | 99.5% | 74.7% |
| 4948508 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.84 | 64.0 | 7.22e-01 | 89.7% | 98.8% |
| 4936084 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.83 | 70.0 | 7.43e-01 | 97.5% | 97.8% |
| 4960192 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.83 | 71.0 | 7.53e-01 | 99.5% | 99.4% |
| 5024273 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.83 | 66.0 | 7.09e-01 | 99.0% | 94.9% |
| 2323953 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.83 | 65.0 | 7.21e-01 | 98.0% | 99.4% |
| 5024566 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.83 | 72.0 | 7.61e-01 | 96.1% | 98.9% |
| None | — | 0.82 | 72.0 | 7.53e-01 | 96.1% | 98.9% | |
| None | — | 0.82 | 78.0 | 7.56e-01 | 99.5% | 96.9% | |
| 5073067 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.82 | 73.0 | 7.58e-01 | 98.5% | 99.5% |
| None | — | 0.82 | 76.0 | 7.75e-01 | 100.0% | 99.0% | |
| None | — | 0.81 | 75.0 | 7.66e-01 | 99.5% | 98.0% | |
| 4366103 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.81 | 76.0 | 7.70e-01 | 100.0% | 99.0% |
| 3615706 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.81 | 77.0 | 5.74e-01 | 99.0% | 78.4% |
| 3712550 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.81 | 76.0 | 5.72e-01 | 98.5% | 78.7% |
| 3618577 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.80 | 77.0 | 6.79e-01 | 100.0% | 77.9% |
| 5061145 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.80 | 74.0 | 7.47e-01 | 100.0% | 97.0% |
| 3248035 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.80 | 76.0 | 6.99e-01 | 99.5% | 84.7% |
| 3558070 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.80 | 77.0 | 5.64e-01 | 100.0% | 77.6% |
| None | — | 0.80 | 75.0 | 7.62e-01 | 99.0% | 99.5% | |
| 4943110 | 2005.1.1.111 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C | 0.80 | 74.0 | 7.50e-01 | 99.5% | 98.5% |
| 3595867 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.80 | 75.0 | 7.29e-01 | 98.0% | 100.0% |
| 5056286 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.79 | 67.0 | 7.19e-01 | 96.1% | 100.0% |
| 5037878 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.79 | 76.0 | 7.00e-01 | 100.0% | 82.8% |
| 4984713 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.79 | 76.0 | 7.61e-01 | 100.0% | 99.5% |
| 5036187 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.78 | 68.0 | 6.96e-01 | 90.7% | 93.8% |
| 5029640 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 75.0 | 7.36e-01 | 100.0% | 96.3% |
| 5073535 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.77 | 70.0 | 6.87e-01 | 100.0% | 88.6% |
| 4202670 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 67.0 | 6.45e-01 | 98.5% | 82.2% |
| None | — | 0.76 | 66.0 | 6.80e-01 | 90.2% | 98.5% | |
| 4172759 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.76 | 61.0 | 6.27e-01 | 89.7% | 86.7% |
| 5015379 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.74 | 63.0 | 5.73e-01 | 100.0% | 68.5% |
| 3603161 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.74 | 71.0 | 6.39e-01 | 100.0% | 79.6% |
| 5015866 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.74 | 70.0 | 6.78e-01 | 99.0% | 96.9% |
| 4322077 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 65.0 | 6.26e-01 | 98.0% | 82.7% |
| 4286560 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 66.0 | 6.31e-01 | 98.0% | 82.6% |
| 3602090 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.73 | 69.0 | 6.70e-01 | 99.0% | 96.0% |
| None | — | 0.73 | 63.0 | 6.34e-01 | 89.7% | 91.2% | |
| 4582525 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.73 | 67.0 | 6.32e-01 | 99.0% | 82.6% |
| 5004524 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.73 | 67.0 | 5.74e-01 | 97.1% | 97.4% |
| 5010330 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.73 | 69.0 | 6.03e-01 | 99.5% | 72.1% |
| 5011726 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.73 | 69.0 | 6.07e-01 | 99.5% | 73.3% |
| 4101393 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 67.0 | 6.31e-01 | 99.5% | 82.1% |
| 4930592 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.72 | 60.0 | 5.90e-01 | 86.8% | 92.3% |
| None | — | 0.72 | 61.0 | 5.98e-01 | 88.2% | 93.2% | |
| 5044033 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.72 | 68.0 | 5.97e-01 | 99.5% | 85.6% |
| 5066233 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 68.0 | 6.02e-01 | 99.5% | 72.5% |
| 3287133 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.72 | 68.0 | 5.24e-01 | 99.5% | 89.9% |
| 4991573 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.72 | 61.0 | 5.93e-01 | 88.7% | 91.1% |
| 4192836 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.71 | 60.0 | 5.72e-01 | 87.3% | 91.5% |
| None | — | 0.71 | 61.0 | 5.87e-01 | 88.2% | 91.6% | |
| 4443198 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.71 | 60.0 | 5.69e-01 | 86.8% | 91.5% |
| 4977476 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.71 | 67.0 | 6.00e-01 | 100.0% | 89.1% |
| 4968614 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.69 | 65.0 | 6.12e-01 | 100.0% | 97.1% |
| None | — | 0.69 | 59.0 | 5.63e-01 | 87.7% | 86.1% | |
| 5037787 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 53.0 | 5.39e-01 | 97.5% | 80.8% |
| None | — | 0.69 | 60.0 | 5.77e-01 | 90.2% | 86.2% | |
| 5012450 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.67 | 62.0 | 5.90e-01 | 96.6% | 93.2% |
| 4927582 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.67 | 63.0 | 4.98e-01 | 100.0% | 71.6% |
| 3602300 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.67 | 53.0 | 4.88e-01 | 81.9% | 98.4% |
| 4037820 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.66 | 58.0 | 5.71e-01 | 91.2% | 87.0% |
| 5016070 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 61.0 | 5.05e-01 | 100.0% | 87.0% |
| 4951053 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.55 | 42.0 | 4.28e-01 | 89.2% | 80.0% |
| 4602018 | 2003.1.1.76 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C | 0.53 | 44.0 | 4.45e-01 | 90.7% | 87.5% |
| 3744163 | 2003.1.5.95 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM13 | 0.50 | 42.0 | 3.67e-01 | 89.2% | 76.2% |
D2
medium
residues 210-338
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 38.0 | 3.73e-01 | 82.9% | 68.6% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.53 | 40.0 | 3.95e-01 | 78.3% | 80.0% |
| 3sjnA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 38.0 | 4.01e-01 | 82.2% | 83.2% |
| 1ignA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 34.0 | 3.95e-01 | 76.7% | 93.5% |
| 2w00A05 | 1.20.58.2040 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 26.0 | 2.91e-01 | 86.0% | 60.4% |