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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00302
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00302
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-156
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.87 | 58.0 | 4.92e-01 | 74.6% | 44.9% |
| 3kd4A02 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.79 | 61.0 | 5.50e-01 | 82.8% | 61.3% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.55 | 34.0 | 3.70e-01 | 100.0% | 72.1% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.54 | 29.0 | 3.11e-01 | 86.9% | 58.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941017 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.91 | 62.0 | 5.72e-01 | 74.6% | 56.7% |
| 5060255 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.90 | 61.0 | 5.26e-01 | 74.6% | 48.0% |
| 5079504 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.90 | 61.0 | 5.50e-01 | 74.6% | 53.1% |
| 4953249 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.90 | 61.0 | 5.51e-01 | 74.6% | 54.2% |
| 3952751 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.88 | 60.0 | 5.00e-01 | 74.6% | 44.2% |
| 4979181 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.88 | 62.0 | 5.30e-01 | 74.6% | 48.1% |
| 5029143 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.87 | 60.0 | 5.42e-01 | 74.6% | 54.4% |
| 5054279 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 58.0 | 5.24e-01 | 77.0% | 52.5% |
| 5081248 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 57.0 | 5.30e-01 | 74.6% | 55.3% |
| 4951884 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.86 | 67.0 | 5.66e-01 | 82.0% | 53.0% |
| 5064712 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.86 | 62.0 | 5.40e-01 | 89.3% | 52.0% |
| 5055945 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.85 | 58.0 | 5.42e-01 | 77.0% | 58.6% |
| 5034467 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.84 | 62.0 | 4.94e-01 | 75.4% | 42.5% |
| 5021450 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 64.0 | 5.44e-01 | 84.4% | 51.6% |
| 4958082 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 64.0 | 5.50e-01 | 83.6% | 54.2% |
| 5082717 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 61.0 | 4.98e-01 | 77.0% | 44.9% |
| 5001455 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.83 | 58.0 | 4.77e-01 | 74.6% | 43.5% |
| 3967895 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 58.0 | 4.73e-01 | 74.6% | 41.9% |
| 5043547 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 62.0 | 5.67e-01 | 87.7% | 61.3% |
| 4980439 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.82 | 60.0 | 5.02e-01 | 74.6% | 48.4% |
| 3165617 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.81 | 59.0 | 4.85e-01 | 74.6% | 45.5% |
| 4951033 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 66.0 | 5.10e-01 | 94.3% | 42.4% |
| 4940356 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.80 | 65.0 | 5.51e-01 | 90.2% | 54.2% |
| 4963199 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.80 | 57.0 | 5.08e-01 | 74.6% | 53.9% |
| 3959126 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.80 | 56.0 | 4.85e-01 | 77.0% | 48.9% |
| 4951834 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 70.0 | 5.70e-01 | 93.4% | 55.2% |
| 146744 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 61.0 | 5.52e-01 | 82.8% | 62.0% |
| 4948573 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.77 | 62.0 | 4.49e-01 | 83.6% | 58.4% |
| 5064007 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.77 | 62.0 | 5.33e-01 | 83.6% | 62.8% |
| 3950847 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 56.0 | 5.04e-01 | 74.6% | 59.4% |
| 4969783 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.76 | 62.0 | 4.46e-01 | 84.4% | 59.9% |
| 3562276 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.53 | 31.0 | 3.42e-01 | 70.5% | 71.0% |
| 3560446 | 109.4.1.3196 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6, TPR_8, TPR_12, TPR_16 | 0.51 | 35.0 | 2.19e-01 | 100.0% | 12.4% |
D2
medium
residues 157-215
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.66 | 44.0 | 4.31e-01 | 100.0% | 62.1% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.63 | 42.0 | 4.15e-01 | 100.0% | 64.1% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.61 | 40.0 | 4.01e-01 | 100.0% | 65.6% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.53 | 40.0 | 3.22e-01 | 83.1% | 75.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1175478 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.52 | 42.0 | 4.05e-01 | 94.9% | 84.7% |
| 4091315 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.50 | 38.0 | 3.17e-01 | 84.7% | 95.5% |