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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00331

Bact-Vir

JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00331

Identity

Kingdom:
phage

Quality

87.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-92
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l4gB02 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.55 41.0 3.23e-01 79.3% 89.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074675 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.50 38.0 3.18e-01 81.5% 57.0%
D2 medium residues 93-203
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 34.0 3.52e-01 99.1% 62.0%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 31.0 3.31e-01 98.2% 63.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3660358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 29.0 3.86e-01 71.2% 75.0%
4954828 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 23.0 3.20e-01 97.3% 78.0%
3913637 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.56 30.0 3.31e-01 88.3% 62.2%
4317931 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.55 31.0 3.47e-01 98.2% 70.6%
4328639 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 31.0 3.32e-01 94.6% 64.2%