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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00335
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00335
Identity
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-53
D2
high
residues 56-149
Domain cluster:
rep: MF001358.1__ASZ76771.1__X__00105__D7-99
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.61 | 49.0 | 4.90e-01 | 92.6% | 86.3% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 43.0 | 2.89e-01 | 75.5% | 33.6% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 37.0 | 4.28e-01 | 70.2% | 95.5% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 34.0 | 2.95e-01 | 70.2% | 38.5% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 49.0 | 3.40e-01 | 100.0% | 45.8% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 38.0 | 2.81e-01 | 70.2% | 48.4% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 40.0 | 2.82e-01 | 76.6% | 33.6% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.78e-01 | 78.7% | 36.5% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.85e-01 | 78.7% | 31.5% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.53 | 37.0 | 3.19e-01 | 72.3% | 88.4% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 36.0 | 2.96e-01 | 71.3% | 67.2% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.52 | 35.0 | 3.50e-01 | 70.2% | 73.7% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.68e-01 | 90.4% | 80.1% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 42.0 | 3.03e-01 | 92.6% | 96.0% |
| 6grrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.85e-01 | 100.0% | 76.2% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 31.0 | 3.52e-01 | 74.5% | 89.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081030 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 56.0 | 6.17e-01 | 86.2% | 94.7% |
| 3287567 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 57.0 | 5.88e-01 | 100.0% | 94.4% |
| 5015074 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.68 | 51.0 | 5.64e-01 | 92.6% | 100.0% |
| 4968686 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.66 | 58.0 | 5.71e-01 | 98.9% | 90.0% |
| 3591336 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.65 | 40.0 | 3.78e-01 | 76.6% | 50.4% |
| 3945861 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.65 | 53.0 | 5.44e-01 | 92.6% | 92.2% |
| 4930969 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.64 | 48.0 | 5.32e-01 | 94.7% | 100.0% |
| 3871241 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.63 | 38.0 | 2.77e-01 | 89.4% | 21.5% |
| 3763863 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.63 | 38.0 | 3.99e-01 | 89.4% | 65.9% |
| 3905680 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.62 | 38.0 | 2.50e-01 | 89.4% | 14.4% |
| 3506401 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 35.0 | 2.48e-01 | 91.5% | 17.1% |
| 4392365 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.59 | 43.0 | 2.91e-01 | 76.6% | 33.4% |
| 5082625 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.59 | 50.0 | 5.13e-01 | 92.6% | 98.9% |
| 3411789 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.59 | 52.0 | 4.58e-01 | 100.0% | 91.4% |
| 4927100 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.58 | 48.0 | 4.91e-01 | 90.4% | 95.6% |
| 434844 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.58 | 34.0 | 3.03e-01 | 70.2% | 40.6% |
| 4957895 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 40.0 | 2.76e-01 | 77.7% | 22.2% |
| 3273135 | 5.1.4.255 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD | 0.55 | 39.0 | 2.62e-01 | 74.5% | 88.6% |
| 3740435 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 41.0 | 2.78e-01 | 78.7% | 35.6% |
| 3233582 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 45.0 | 3.16e-01 | 92.6% | 32.4% |
| 3538869 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.53 | 47.0 | 3.96e-01 | 100.0% | 73.3% |
| 3705749 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 2.86e-01 | 100.0% | 26.9% |
| 3676414 | 206.1.2.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › PIP5K | 0.53 | 44.0 | 3.61e-01 | 92.6% | 58.3% |
| 3788671 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.53 | 36.0 | 3.03e-01 | 70.2% | 97.6% |
| 3898218 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.53 | 47.0 | 3.85e-01 | 100.0% | 68.6% |
| 3741285 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.53 | 33.0 | 3.35e-01 | 71.3% | 63.2% |
| 4002416 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.52 | 46.0 | 3.89e-01 | 98.9% | 75.6% |
| 3209880 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.52 | 42.0 | 3.88e-01 | 86.2% | 77.5% |
| 4041632 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 31.0 | 2.74e-01 | 100.0% | 37.2% |
| 4797890 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.52 | 34.0 | 3.53e-01 | 71.3% | 72.9% |
| 3773831 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 43.0 | 2.64e-01 | 92.6% | 48.3% |
| 3422280 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 43.0 | 4.15e-01 | 100.0% | 79.8% |
| 3706884 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 36.0 | 3.49e-01 | 74.5% | 87.3% |
| 5010707 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.51 | 41.0 | 3.32e-01 | 89.4% | 83.2% |
| 3774282 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 45.0 | 3.86e-01 | 100.0% | 75.3% |
| 3964905 | 5084.1.1.13 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HpuA | 0.50 | 44.0 | 3.19e-01 | 100.0% | 88.1% |