←Back to structures
JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00339
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00339
Identity
- Kingdom:
- phage
Quality
51.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 176-259
D2
high
residues 285-398
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 36.0 | 3.60e-01 | 94.7% | 50.4% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.59 | 46.0 | 4.38e-01 | 93.9% | 71.8% |
| 2xq0A03 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.53 | 40.0 | 3.70e-01 | 81.6% | 87.3% |
| 1mixA01 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.53 | 35.0 | 3.71e-01 | 81.6% | 77.6% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.50 | 39.0 | 4.13e-01 | 82.5% | 98.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590799 | 191.1.1.12 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_8 | 0.55 | 45.0 | 4.41e-01 | 90.4% | 94.4% |
| 3290076 | 191.1.1.42 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_41 | 0.55 | 43.0 | 4.19e-01 | 84.2% | 90.3% |
| 5033158 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.54 | 47.0 | 4.25e-01 | 93.0% | 78.7% |
| 3712540 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.53 | 46.0 | 4.11e-01 | 95.6% | 80.6% |
| 4659183 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.52 | 44.0 | 4.08e-01 | 94.7% | 74.0% |
| 4106383 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.51 | 45.0 | 4.04e-01 | 98.2% | 76.9% |
| 4600042 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 41.0 | 3.40e-01 | 90.4% | 68.4% |