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JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00349
Bact-VirJBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00349
Identity
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-102
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u5ei01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.74 | 51.0 | 4.81e-01 | 72.7% | 67.2% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.61 | 50.0 | 4.84e-01 | 98.2% | 81.5% |
| 1wp9B03 | 1.20.1320.20 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › hef helicase domain | 0.61 | 44.0 | 3.49e-01 | 81.8% | 82.3% |
| 2l9bA00 | 1.25.40.630 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 41.0 | 3.53e-01 | 90.9% | 44.0% |
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 38.0 | 3.67e-01 | 100.0% | 56.2% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.91e-01 | 74.5% | 77.6% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.57 | 44.0 | 4.32e-01 | 85.5% | 86.9% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 49.0 | 3.68e-01 | 100.0% | 100.0% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 34.0 | 3.08e-01 | 92.7% | 42.9% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.68e-01 | 78.2% | 57.9% |
| 1xqiA00 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.55 | 47.0 | 3.32e-01 | 100.0% | 53.3% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 39.0 | 3.51e-01 | 81.8% | 69.5% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 42.0 | 3.83e-01 | 100.0% | 83.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999777 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 49.0 | 5.33e-01 | 78.2% | 93.3% |
| 3225517 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.65 | 48.0 | 4.49e-01 | 81.8% | 62.9% |
| 3953243 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.65 | 59.0 | 3.81e-01 | 100.0% | 34.9% |
| 3250165 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 52.0 | 5.12e-01 | 89.1% | 88.3% |
| 3618452 | 101.1.1.52 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD | 0.61 | 49.0 | 4.99e-01 | 89.1% | 94.5% |
| 3266230 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.60 | 48.0 | 4.76e-01 | 92.7% | 86.7% |
| 3527457 | 101.1.1.52 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD | 0.60 | 48.0 | 4.88e-01 | 90.9% | 90.9% |
| 1109551 | 604.17.1.1 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C | 0.58 | 37.0 | 3.51e-01 | 90.9% | 54.5% |
| 1495412 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.57 | 47.0 | 2.82e-01 | 96.4% | 55.6% |
| 3392449 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.51 | 42.0 | 3.04e-01 | 98.2% | 41.7% |
| 3668670 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.51 | 37.0 | 2.28e-01 | 81.8% | 33.1% |
| 3626468 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.51 | 40.0 | 2.78e-01 | 87.3% | 44.1% |
| 4338005 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 41.0 | 2.85e-01 | 90.9% | 48.1% |