JBCH_GD18_scaffold_652796_prodigal-single.1XX__00358

Bact-Vir

JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00358

Identity

78.6 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-112

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3o8oF01	3.40.50.450	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	44.0	3.49e-01	95.0%	96.0%
3qthB00	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.51	37.0	3.16e-01	76.0%	88.4%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4927336	375.8.1.0 ↗	few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta	0.62	23.0	3.70e-01	72.0%	94.3%
4665476	5081.1.1.1 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid	0.52	41.0	3.23e-01	85.0%	56.7%
4023091	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.51	40.0	2.83e-01	92.0%	25.4%
3614763	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.51	29.0	2.76e-01	72.0%	45.8%
5065206	3896.1.2.0 ↗	alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase	0.51	32.0	2.72e-01	88.0%	37.1%
3365579	376.1.1.20 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX	0.50	29.0	3.04e-01	76.0%	60.0%