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JF314845.1__AEM24714.1__X__00030
Bact-VirJF314845.1__AEM24714.1__X__00030
Identity
- Accession:
- JF314845 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-108
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.68 | 59.0 | 5.88e-01 | 93.5% | 92.6% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.61 | 42.0 | 4.72e-01 | 77.2% | 100.0% |
| 3u3lC00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.60 | 53.0 | 4.03e-01 | 100.0% | 72.6% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 43.0 | 4.03e-01 | 73.9% | 96.4% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 34.0 | 2.93e-01 | 97.8% | 32.7% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 37.0 | 3.93e-01 | 70.7% | 74.7% |
| 3lsoA03 | 2.60.40.2260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 41.0 | 3.45e-01 | 75.0% | 65.8% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 3.68e-01 | 77.2% | 94.1% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.56 | 39.0 | 3.53e-01 | 71.7% | 57.0% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 3.04e-01 | 73.9% | 53.8% |
| 1uyjA02 | 2.170.15.10 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 | 0.51 | 43.0 | 3.50e-01 | 98.9% | 89.5% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 36.0 | 3.16e-01 | 76.1% | 84.7% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 36.0 | 3.11e-01 | 75.0% | 93.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4215969 | 872.3.1.1 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 | 0.68 | 59.0 | 5.45e-01 | 93.5% | 91.2% |
| 3955529 | 872.3.1.1 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 | 0.63 | 54.0 | 5.25e-01 | 91.3% | 95.0% |
| 4929266 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.63 | 43.0 | 4.79e-01 | 78.3% | 94.3% |
| 3391176 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.60 | 53.0 | 3.96e-01 | 100.0% | 73.6% |
| 6057 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.57 | 41.0 | 3.68e-01 | 76.1% | 94.1% |
| 3508739 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.57 | 51.0 | 4.07e-01 | 100.0% | 82.2% |
| 3371571 | 886.1.1.1 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › SOUL | 0.53 | 46.0 | 3.75e-01 | 97.8% | 97.1% |
| 3597812 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 39.0 | 3.55e-01 | 81.5% | 98.5% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.52 | 37.0 | 3.32e-01 | 76.1% | 82.1% |
| 3298960 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 35.0 | 3.97e-01 | 73.9% | 97.1% |
| 4469156 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.50 | 43.0 | 3.72e-01 | 98.9% | 71.6% |
| 3272801 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.50 | 35.0 | 2.36e-01 | 73.9% | 30.1% |