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JF344709.1__AEG42318.1__X__00021
Bact-VirJF344709.1__AEG42318.1__X__00021
Identity
- Accession:
- JF344709 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-111_218-326
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.49e-01 | 75.1% | 96.1% |
| 2b4aA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 41.0 | 5.20e-01 | 74.6% | 100.0% |
| 3cu5B00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 42.0 | 5.06e-01 | 74.6% | 96.9% |
| 2fh5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 44.0 | 4.57e-01 | 71.1% | 100.0% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 42.0 | 4.71e-01 | 73.6% | 88.6% |
| 6ouvA03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 38.0 | 4.56e-01 | 76.6% | 93.2% |
| 2o1sB03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 37.0 | 4.46e-01 | 98.5% | 92.9% |
| 1u8zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 4.69e-01 | 74.1% | 98.2% |
| 1y1pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.14e-01 | 93.4% | 96.6% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 43.0 | 4.69e-01 | 87.3% | 98.1% |
| 3f4wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 42.0 | 4.19e-01 | 98.5% | 74.4% |
| 4mcjG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 37.0 | 4.16e-01 | 70.6% | 87.0% |
| 7bmfA01 | 3.90.1640.30 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › | 0.55 | 43.0 | 4.42e-01 | 94.9% | 87.0% |
| 5exeA02 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 37.0 | 4.24e-01 | 96.4% | 93.8% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.53 | 27.0 | 3.71e-01 | 96.4% | 97.9% |
| 5x4kA01 | 3.90.1640.30 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › | 0.53 | 43.0 | 4.39e-01 | 94.9% | 88.4% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.53 | 33.0 | 3.65e-01 | 72.1% | 76.4% |
| 1a3wA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.53 | 33.0 | 3.73e-01 | 72.1% | 80.0% |
| 1losA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 42.0 | 4.13e-01 | 97.0% | 77.3% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 46.0 | 4.22e-01 | 97.0% | 74.7% |
| 6w6aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 45.0 | 4.21e-01 | 95.9% | 78.3% |
| 7pceA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 4.25e-01 | 97.5% | 90.3% |
| 5w6lA01 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 36.0 | 3.43e-01 | 99.0% | 62.1% |
| 2iv2X02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 39.0 | 3.52e-01 | 80.2% | 77.6% |
| 3tr2B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 42.0 | 4.05e-01 | 97.5% | 78.7% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 44.0 | 3.58e-01 | 93.9% | 91.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988098 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.84 | 80.0 | 7.48e-01 | 100.0% | 93.2% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 79.0 | 6.96e-01 | 99.5% | 93.5% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.83 | 77.0 | 7.33e-01 | 97.0% | 100.0% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 79.0 | 7.17e-01 | 100.0% | 93.6% |
| 3948874 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.82 | 76.0 | 7.08e-01 | 98.0% | 93.3% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 78.0 | 7.04e-01 | 100.0% | 96.9% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.79 | 68.0 | 5.99e-01 | 90.4% | 93.2% |
| 2391375 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.78 | 74.0 | 7.01e-01 | 99.5% | 90.4% |
| 3947382 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.78 | 62.0 | 5.14e-01 | 82.7% | 83.3% |
| 1515363 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.71 | 62.0 | 5.36e-01 | 92.9% | 94.3% |
| 3824245 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.68 | 42.0 | 4.90e-01 | 73.1% | 86.4% |
| 4928830 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.67 | 42.0 | 5.08e-01 | 72.1% | 94.6% |
| 5082638 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.66 | 40.0 | 4.72e-01 | 91.4% | 85.9% |
| 4642315 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 41.0 | 4.85e-01 | 99.0% | 91.1% |
| 3966779 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.65 | 39.0 | 4.75e-01 | 99.0% | 90.7% |
| 4946278 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.65 | 35.0 | 4.55e-01 | 74.6% | 90.4% |
| 4968893 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.63 | 49.0 | 4.26e-01 | 80.2% | 83.4% |
| 3403704 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.63 | 44.0 | 5.08e-01 | 99.0% | 98.6% |
| 5019229 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.63 | 43.0 | 4.95e-01 | 93.4% | 93.8% |
| 5062615 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.62 | 44.0 | 4.93e-01 | 75.1% | 92.7% |
| 5049322 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 45.0 | 4.62e-01 | 73.6% | 90.5% |
| 5057081 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.62 | 41.0 | 4.76e-01 | 74.6% | 92.9% |
| 4982518 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.61 | 35.0 | 4.08e-01 | 71.6% | 77.1% |
| 5064221 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.60 | 38.0 | 4.16e-01 | 74.1% | 75.2% |
| 5053367 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 34.0 | 4.07e-01 | 94.4% | 83.1% |
| 5068253 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.59 | 35.0 | 4.22e-01 | 92.4% | 88.5% |
| 3875609 | 2004.1.1.512 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP | 0.58 | 42.0 | 3.56e-01 | 75.1% | 52.1% |
| None | — | 0.55 | 40.0 | 3.51e-01 | 74.6% | 56.9% | |
| 4948382 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.55 | 29.0 | 3.55e-01 | 99.0% | 78.1% |
| 4952900 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.54 | 42.0 | 2.94e-01 | 95.9% | 24.6% |
| 4114739 | 2003.6.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase | 0.53 | 49.0 | 4.35e-01 | 100.0% | 77.9% |
| 5004301 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.53 | 40.0 | 3.55e-01 | 95.9% | 53.3% |
| 4073250 | 2003.1.4.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M | 0.53 | 37.0 | 3.78e-01 | 73.6% | 73.2% |
| 5037606 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.51 | 41.0 | 3.81e-01 | 93.9% | 65.1% |
| 4988630 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.51 | 43.0 | 3.89e-01 | 94.9% | 66.4% |
| 4043614 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.51 | 40.0 | 3.90e-01 | 97.0% | 73.4% |
| 4009449 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.50 | 39.0 | 3.05e-01 | 80.7% | 58.4% |
D2
high
residues 120-208
Domain cluster:
rep: CG10_big_fil_rev_8_21_14_0-10_scaffold_17_prodigal-single.1__X__X__00056__D41-144
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fcaA02 | 3.40.390.80 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Peptidase M60, enhancin-like domain 2 | 0.66 | 47.0 | 4.11e-01 | 75.3% | 78.5% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.63 | 52.0 | 3.75e-01 | 91.0% | 92.0% |
| 2epkX01 | 3.30.160.230 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase | 0.61 | 44.0 | 4.66e-01 | 76.4% | 86.3% |
| 3rcnA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.58 | 43.0 | 3.82e-01 | 79.8% | 64.1% |
| 1uf3A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 43.0 | 3.32e-01 | 86.5% | 95.2% |
| 2o2xA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 48.0 | 3.73e-01 | 97.8% | 65.4% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 43.0 | 3.95e-01 | 83.1% | 82.9% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 38.0 | 3.12e-01 | 71.9% | 86.5% |
| 4jiuA00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.55 | 41.0 | 3.92e-01 | 79.8% | 78.1% |
| 2f4nA01 | 3.40.50.10790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | 0.55 | 41.0 | 3.59e-01 | 83.1% | 91.2% |
| 2gj8D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 3.29e-01 | 79.8% | 92.4% |
| 6whcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.02e-01 | 78.7% | 60.3% |
| 3ck2A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 40.0 | 3.29e-01 | 82.0% | 87.9% |
| 1egaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.18e-01 | 79.8% | 95.6% |
| 1o22A00 | 3.90.1000.10 | Alpha Beta › Alpha-Beta Complex › Orphan Protein Tm0875; Chain: A; › Hypothetical protein TM0875 | 0.52 | 45.0 | 3.87e-01 | 96.6% | 100.0% |
| 3u7eB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 44.0 | 3.56e-01 | 97.8% | 61.7% |
| 1knxE02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 36.0 | 3.01e-01 | 74.2% | 85.1% |
| 2h3hA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 38.0 | 3.31e-01 | 79.8% | 79.7% |
| 1qhwA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 39.0 | 2.81e-01 | 83.1% | 91.0% |
| 5d8nA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 44.0 | 3.50e-01 | 97.8% | 84.6% |
| 3vpzA02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.50 | 41.0 | 3.23e-01 | 91.0% | 93.5% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.50 | 40.0 | 3.20e-01 | 91.0% | 93.5% |
| 1z06A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 3.05e-01 | 77.5% | 99.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3110622 | 2498.1.1.24 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M61 | 0.70 | 55.0 | 3.92e-01 | 84.3% | 48.1% |
| 4967466 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.70 | 52.0 | 4.93e-01 | 78.7% | 88.6% |
| 5080625 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 46.0 | 4.27e-01 | 71.9% | 65.2% |
| 4969796 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.65 | 46.0 | 4.41e-01 | 73.0% | 67.0% |
| 4966006 | 2498.1.1.163 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF5781 | 0.64 | 50.0 | 3.64e-01 | 83.1% | 55.0% |
| 5061805 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 45.0 | 4.18e-01 | 73.0% | 67.3% |
| 4944719 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.62 | 44.0 | 3.64e-01 | 74.2% | 43.2% |
| 4929588 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.61 | 46.0 | 3.79e-01 | 78.7% | 69.4% |
| 3957469 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.61 | 44.0 | 3.75e-01 | 76.4% | 54.7% |
| 5006204 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.61 | 44.0 | 3.38e-01 | 76.4% | 39.5% |
| 4934179 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 43.0 | 3.19e-01 | 75.3% | 27.3% |
| 3754954 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 43.0 | 3.20e-01 | 74.2% | 30.0% |
| 5016438 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.60 | 44.0 | 3.66e-01 | 76.4% | 52.3% |
| 3519842 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.60 | 40.0 | 3.14e-01 | 100.0% | 31.3% |
| 3868678 | 2498.1.1.65 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP | 0.60 | 44.0 | 3.01e-01 | 77.5% | 66.1% |
| 4974758 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.60 | 42.0 | 3.55e-01 | 74.2% | 86.5% |
| 5035384 | 306.4.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like | 0.59 | 40.0 | 4.42e-01 | 86.5% | 90.0% |
| 4521212 | 2498.2.1.8 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › PF29164 | 0.59 | 43.0 | 3.64e-01 | 77.5% | 79.3% |
| 4015093 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 46.0 | 4.04e-01 | 85.4% | 83.7% |
| 3630394 | 2498.1.1.11 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N | 0.58 | 43.0 | 2.82e-01 | 79.8% | 47.5% |
| 4929660 | 306.4.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like › DUF167 | 0.57 | 42.0 | 4.61e-01 | 86.5% | 100.0% |
| 3993461 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.57 | 40.0 | 2.71e-01 | 74.2% | 22.1% |
| 5083216 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.56 | 43.0 | 3.44e-01 | 82.0% | 71.7% |
| 4244411 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.04e-01 | 91.0% | 94.8% |
| 3595977 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 43.0 | 4.29e-01 | 84.3% | 95.6% |
| 4110011 | 306.4.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › YggU-like › YggU-like › DUF167 | 0.54 | 40.0 | 4.06e-01 | 84.3% | 80.0% |
| 3250027 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 40.0 | 3.07e-01 | 79.8% | 48.1% |
| 3229321 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 38.0 | 2.78e-01 | 76.4% | 42.0% |
| 5011605 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 39.0 | 3.10e-01 | 78.7% | 53.3% |
| 4465757 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 2.84e-01 | 83.1% | 92.9% |
| 4143587 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 37.0 | 2.97e-01 | 76.4% | 55.5% |
| 3615051 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 36.0 | 2.45e-01 | 74.2% | 54.2% |
| 4989889 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.51 | 41.0 | 3.70e-01 | 87.6% | 63.2% |
| 3788032 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 38.0 | 2.86e-01 | 80.9% | 66.4% |
| 3871810 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 40.0 | 2.46e-01 | 88.8% | 37.7% |
D3
high
residues 327-407
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 43.0 | 3.54e-01 | 100.0% | 34.7% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 27.0 | 3.88e-01 | 70.4% | 100.0% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.64 | 38.0 | 3.78e-01 | 95.1% | 55.8% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.63 | 41.0 | 4.36e-01 | 96.3% | 76.1% |
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.62 | 41.0 | 3.00e-01 | 70.4% | 25.2% |
| 1g0uE00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.62 | 52.0 | 3.75e-01 | 92.6% | 64.3% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 50.0 | 4.81e-01 | 95.1% | 100.0% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 43.0 | 2.90e-01 | 84.0% | 80.8% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 48.0 | 4.00e-01 | 97.5% | 62.1% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.55 | 48.0 | 3.26e-01 | 100.0% | 32.8% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.54 | 43.0 | 4.22e-01 | 87.7% | 95.6% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 42.0 | 3.62e-01 | 87.7% | 79.1% |
| 2gs8A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 42.0 | 3.56e-01 | 87.7% | 91.4% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.53 | 35.0 | 2.96e-01 | 98.8% | 38.6% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 45.0 | 3.32e-01 | 100.0% | 70.8% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.52 | 45.0 | 3.48e-01 | 97.5% | 59.9% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.42e-01 | 96.3% | 75.4% |
| 3emiA00 | 3.90.1780.10 | Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin | 0.51 | 31.0 | 2.81e-01 | 77.8% | 44.5% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 43.0 | 3.52e-01 | 100.0% | 66.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 44.0 | 3.11e-01 | 100.0% | 40.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3666479 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.66 | 35.0 | 2.79e-01 | 97.5% | 27.1% |
| 3533348 | 3476.1.1.0 ↗ | alpha arrays › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain | 0.65 | 42.0 | 4.39e-01 | 100.0% | 72.0% |
| 3250261 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.64 | 40.0 | 3.91e-01 | 100.0% | 57.8% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.58 | 47.0 | 3.60e-01 | 91.4% | 90.2% |
| 5028244 | 304.1.1.3 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › MDD_C | 0.57 | 45.0 | 3.67e-01 | 85.2% | 89.3% |
| 3381794 | 207.1.1.57 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 | 0.57 | 39.0 | 2.18e-01 | 72.8% | 5.5% |
| 3168821 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 43.0 | 2.87e-01 | 85.2% | 69.0% |
| 3327381 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.54 | 43.0 | 2.49e-01 | 88.9% | 43.7% |
| 4996628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 39.0 | 2.91e-01 | 76.5% | 91.6% |
| 3240179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 47.0 | 4.31e-01 | 100.0% | 94.3% |
| 1202333 | 304.1.1.3 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › MDD_C | 0.53 | 42.0 | 3.56e-01 | 90.1% | 74.5% |
| 3583102 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 40.0 | 4.09e-01 | 82.7% | 85.0% |
| 5028837 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.52 | 30.0 | 3.18e-01 | 92.6% | 64.3% |
| 3806349 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.51 | 43.0 | 2.59e-01 | 91.4% | 16.7% |
| 4507143 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.51 | 41.0 | 2.84e-01 | 90.1% | 44.3% |
| 3428211 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.51 | 40.0 | 2.47e-01 | 85.2% | 25.1% |
| 3465019 | 601.1.1.54 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF4220 | 0.50 | 42.0 | 3.31e-01 | 92.6% | 92.0% |
| 5031473 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.50 | 32.0 | 3.02e-01 | 91.4% | 49.5% |
| 4182095 | 2004.1.1.80 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin | 0.50 | 42.0 | 3.18e-01 | 98.8% | 80.7% |