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JF713456.1__AEH21927.1__X__00114

Bact-Vir

JF713456.1__AEH21927.1__X__00114

Identity

Accession:
JF713456 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1

TaxID: 187944

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-56
PDB
Domain cluster: rep: MT560058.1__QPI17827.1__POP12_035__00035__D31-87
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w0tA00 3.30.60.160 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.67 48.0 5.22e-01 75.0% 100.0%
3vhtB02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 37.0 4.42e-01 73.2% 100.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 47.0 3.85e-01 100.0% 45.0%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 46.0 3.82e-01 100.0% 46.2%
4iduB01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.54 44.0 3.58e-01 100.0% 66.9%
3goxA03 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.54 43.0 3.87e-01 91.1% 74.1%
2jubA01 3.30.160.860 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 33.0 3.70e-01 80.4% 94.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4224283 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 46.0 4.71e-01 94.6% 98.2%
4037084 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 3.64e-01 87.5% 99.0%
3910642 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.56 39.0 4.12e-01 76.8% 94.0%
3249506 386.1.1.3 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-TRAF 0.55 39.0 3.83e-01 75.0% 76.7%
4996551 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 47.0 3.57e-01 100.0% 49.3%
2760350 109.2.1.14 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › DUF608 0.52 41.0 2.66e-01 98.2% 98.0%
3997883 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 41.0 3.35e-01 96.4% 68.1%