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JF734911.1__AET85165.1__X__00011
Bact-VirJF734911.1__AET85165.1__X__00011
Identity
- Accession:
- JF734911 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Taxonomy
TaxID: 1069378
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 60-122
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5awwY00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.70 | 45.0 | 2.72e-01 | 95.2% | 9.9% |
| 4f0aB02 | 3.30.2460.20 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain | 0.63 | 35.0 | 3.51e-01 | 71.4% | 48.5% |
| 3zbqA00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.59 | 48.0 | 3.06e-01 | 88.9% | 23.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3605494 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.83 | 66.0 | 5.34e-01 | 85.7% | 87.8% |
| 4597941 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.82 | 62.0 | 4.31e-01 | 81.0% | 32.3% |
| 4128054 | 601.51.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N,Flagellin_C | 0.81 | 63.0 | 3.81e-01 | 82.5% | 16.6% |
| 5026457 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.77 | 61.0 | 4.23e-01 | 87.3% | 63.9% |
| 3470394 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.76 | 47.0 | 2.90e-01 | 100.0% | 11.8% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.76 | 65.0 | 4.58e-01 | 93.7% | 62.7% |
| 5056727 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.76 | 60.0 | 4.20e-01 | 87.3% | 65.9% |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.76 | 61.0 | 4.27e-01 | 87.3% | 68.2% |
| 3624229 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.76 | 63.0 | 4.00e-01 | 88.9% | 86.7% |
| 4356113 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.75 | 60.0 | 4.29e-01 | 87.3% | 71.4% |
| 4574817 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 51.0 | 3.31e-01 | 73.0% | 32.8% |
| 3495008 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.67 | 56.0 | 3.41e-01 | 96.8% | 15.3% |
| 3907851 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.67 | 41.0 | 2.65e-01 | 87.3% | 13.2% |
| 3938146 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.64 | 45.0 | 2.83e-01 | 82.5% | 13.6% |
| 3243038 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.61 | 46.0 | 2.84e-01 | 88.9% | 14.5% |
| 3933064 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.61 | 42.0 | 2.73e-01 | 81.0% | 15.3% |
| 5044501 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 40.0 | 3.25e-01 | 73.0% | 67.3% |
| 3274454 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.57 | 49.0 | 2.89e-01 | 100.0% | 49.9% |
| 3236544 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.56 | 42.0 | 2.66e-01 | 79.4% | 75.8% |
| 5052173 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.56 | 35.0 | 3.35e-01 | 100.0% | 53.3% |
| 3303787 | 109.4.1.1266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, ARM_PUB | 0.52 | 40.0 | 2.63e-01 | 93.7% | 71.1% |
| 3867644 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.52 | 39.0 | 2.55e-01 | 82.5% | 32.2% |
D2
medium
residues 123-173
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.63 | 53.0 | 3.61e-01 | 96.1% | 56.2% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.54e-01 | 100.0% | 95.6% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 48.0 | 3.71e-01 | 94.1% | 42.4% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 42.0 | 3.35e-01 | 74.5% | 72.6% |
| 3n5nX01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.58 | 41.0 | 3.22e-01 | 76.5% | 38.8% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.58 | 40.0 | 3.59e-01 | 74.5% | 61.0% |
| 2w00A02 | 3.90.640.50 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.57 | 43.0 | 3.85e-01 | 82.4% | 100.0% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 38.0 | 3.69e-01 | 74.5% | 81.0% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 38.0 | 2.77e-01 | 76.5% | 26.1% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 41.0 | 3.26e-01 | 82.4% | 75.0% |
| 1s4eG02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.54 | 46.0 | 3.34e-01 | 100.0% | 32.7% |
| 1sqmA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.53 | 43.0 | 3.20e-01 | 94.1% | 67.8% |
| 2c2nA01 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.53 | 47.0 | 3.01e-01 | 100.0% | 31.2% |
| 7kdfB01 | 1.10.418.60 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit | 0.53 | 42.0 | 3.18e-01 | 98.0% | 82.9% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 44.0 | 3.74e-01 | 100.0% | 58.3% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.50 | 41.0 | 3.69e-01 | 100.0% | 71.8% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.50 | 41.0 | 3.73e-01 | 96.1% | 67.6% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 36.0 | 3.30e-01 | 98.0% | 55.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838693 | 3201.1.1.1 ↗ | alpha arrays › HP0721 › HP0721 › HP0721 › DUF1104 | 0.74 | 52.0 | 4.18e-01 | 74.5% | 47.4% |
| 5001284 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 48.0 | 3.39e-01 | 94.1% | 23.7% |
| 4355733 | 109.4.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N | 0.66 | 59.0 | 3.57e-01 | 98.0% | 83.0% |
| 3765900 | 109.4.1.470 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2 | 0.66 | 48.0 | 3.64e-01 | 80.4% | 43.2% |
| 3059418 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.64 | 53.0 | 3.64e-01 | 96.1% | 63.9% |
| 3716601 | 109.4.1.265 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CEP104-like_TOG | 0.64 | 51.0 | 3.16e-01 | 88.2% | 26.7% |
| 3785210 | 109.4.1.2693 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27739, PF27740 | 0.64 | 50.0 | 2.89e-01 | 88.2% | 22.6% |
| 4881130 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.63 | 43.0 | 3.58e-01 | 100.0% | 40.0% |
| 4583551 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.63 | 45.0 | 3.76e-01 | 78.4% | 88.4% |
| 3719682 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.63 | 43.0 | 3.39e-01 | 74.5% | 69.2% |
| 3883423 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 49.0 | 3.02e-01 | 100.0% | 16.1% |
| 4934138 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.54 | 45.0 | 4.47e-01 | 96.1% | 98.2% |
| 4934796 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.54 | 44.0 | 3.72e-01 | 100.0% | 52.2% |
| 3870913 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.53 | 47.0 | 2.97e-01 | 100.0% | 29.6% |