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JF937101.1__AEK09565.1__LITTLEE_186__00186

Bact-Vir

JF937101.1__AEK09565.1__LITTLEE_186__00186

Identity

Accession:
JF937101 ↗
Kingdom:
phage

Quality

70.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-96
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.71 43.0 3.87e-01 81.0% 45.1%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 41.0 4.30e-01 78.6% 63.2%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.71 45.0 4.85e-01 94.0% 76.1%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 34.0 3.48e-01 72.6% 46.4%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.70 39.0 4.58e-01 79.8% 78.3%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.66 41.0 3.41e-01 88.1% 35.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.64 37.0 3.67e-01 76.2% 53.9%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 51.0 4.46e-01 90.5% 64.8%
1k8kD01 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 52.0 4.31e-01 95.2% 69.5%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.02e-01 94.0% 90.4%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 38.0 4.50e-01 79.8% 96.4%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 51.0 4.45e-01 94.0% 68.2%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.59 46.0 3.85e-01 84.5% 88.1%
1vwxr00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.56 46.0 4.10e-01 95.2% 60.8%
1qw9A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 41.0 3.54e-01 77.4% 86.5%
4zk3A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 43.0 3.76e-01 82.1% 69.3%
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 43.0 3.67e-01 82.1% 68.2%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 36.0 3.67e-01 79.8% 66.7%
3s2cJ01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 40.0 3.41e-01 76.2% 87.1%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 40.0 3.67e-01 78.6% 88.5%
1jmoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 42.0 3.45e-01 82.1% 70.7%
3i1aA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 45.0 4.19e-01 89.3% 77.7%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 46.0 3.21e-01 98.8% 92.2%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 45.0 3.27e-01 97.6% 88.3%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.49e-01 84.5% 61.2%
5c98B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 41.0 3.60e-01 85.7% 70.5%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 45.0 3.16e-01 98.8% 83.4%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.61e-01 100.0% 80.6%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.51 37.0 3.54e-01 92.9% 62.5%
6xmtA02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.51 43.0 3.46e-01 94.0% 71.4%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.51 44.0 3.45e-01 95.2% 83.1%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.51 45.0 3.60e-01 100.0% 80.7%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 38.0 2.71e-01 81.0% 55.7%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 37.0 3.17e-01 78.6% 88.0%
5ncsA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.50 40.0 3.40e-01 85.7% 72.7%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.50 33.0 3.29e-01 78.6% 62.6%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032161 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.71 36.0 4.13e-01 77.4% 64.1%
3988645 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.67 34.0 4.42e-01 75.0% 88.9%
1147819 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.67 39.0 3.67e-01 77.4% 48.5%
3592804 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.67 59.0 4.23e-01 100.0% 70.7%
3170786 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.65 46.0 3.57e-01 91.7% 34.9%
3567723 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.65 57.0 4.06e-01 100.0% 63.1%
5028140 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.64 35.0 3.68e-01 73.8% 60.0%
139726 241.1.1.3 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.63 53.0 4.53e-01 90.5% 63.9%
3261801 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.63 55.0 4.00e-01 100.0% 67.8%
3259014 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.63 55.0 3.97e-01 100.0% 65.2%
3979569 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 38.0 3.44e-01 86.9% 45.5%
3225547 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.62 53.0 4.20e-01 96.4% 91.7%
3706107 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.61 53.0 3.95e-01 100.0% 69.1%
3691227 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.61 38.0 3.42e-01 81.0% 46.1%
3999279 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.60 51.0 4.10e-01 96.4% 89.1%
3396868 223.2.1.46 a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M 0.60 45.0 3.82e-01 91.7% 47.9%
3177145 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.60 40.0 3.80e-01 78.6% 58.0%
3520408 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.60 51.0 4.12e-01 96.4% 91.2%
3420734 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.60 51.0 3.74e-01 95.2% 80.9%
3176554 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.60 50.0 3.58e-01 95.2% 62.9%
3581710 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.59 50.0 3.73e-01 95.2% 76.0%
4464027 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.58 47.0 4.27e-01 90.5% 73.9%
3396115 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.58 49.0 4.04e-01 95.2% 96.1%
3480732 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 43.0 3.91e-01 78.6% 100.0%
3393992 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 50.0 3.78e-01 96.4% 90.0%
3350507 11.1.1.394 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF568 0.57 49.0 4.02e-01 96.4% 91.9%
3514520 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 46.0 3.50e-01 90.5% 65.6%
4629064 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.57 46.0 3.77e-01 90.5% 51.5%
4646540 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.57 48.0 3.68e-01 94.0% 42.2%
3199180 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 47.0 3.50e-01 91.7% 65.5%
3928763 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 49.0 3.93e-01 95.2% 89.7%
3970566 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 40.0 3.26e-01 76.2% 74.6%
3730606 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 45.0 3.38e-01 90.5% 68.5%
3759836 220.1.1.156 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30805 0.56 42.0 3.73e-01 84.5% 53.1%
3504134 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.56 42.0 3.80e-01 79.8% 99.1%
3653586 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.55 46.0 3.54e-01 90.5% 95.1%
3875748 12.3.1.18 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N 0.55 48.0 3.13e-01 95.2% 81.4%
3481307 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 41.0 3.48e-01 79.8% 97.9%
3628410 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.55 41.0 3.80e-01 79.8% 97.3%
3543640 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.55 46.0 3.87e-01 96.4% 91.6%
4127864 12.1.1.3 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C 0.54 40.0 3.98e-01 78.6% 94.4%
5083438 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.54 44.0 3.60e-01 90.5% 49.7%
3938374 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.54 41.0 3.80e-01 79.8% 99.0%
3185418 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 47.0 3.32e-01 97.6% 61.2%
3273331 2.9.1.1 beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.54 48.0 3.13e-01 100.0% 50.1%
3212872 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.98e-01 90.5% 79.1%
3429464 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.53 38.0 3.04e-01 73.8% 41.1%
3694970 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.53 44.0 3.32e-01 95.2% 64.9%
3403124 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.53 41.0 3.47e-01 83.3% 98.6%
3543997 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.53 41.0 3.46e-01 83.3% 97.1%
3594086 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.52 43.0 3.11e-01 91.7% 43.5%
None 0.52 44.0 3.57e-01 90.5% 56.9%
185414 3347.1.1.1 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.52 41.0 3.50e-01 84.5% 61.6%
4500602 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 40.0 3.90e-01 84.5% 84.2%
4398167 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.52 41.0 4.04e-01 85.7% 92.0%
3567020 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.91e-01 82.1% 93.3%
3658748 4099.1.1.14 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C 0.51 44.0 4.14e-01 98.8% 78.0%
3377637 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 36.0 2.49e-01 88.1% 22.6%
3186366 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.51 38.0 2.76e-01 79.8% 68.1%
3744541 220.1.1.196 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SPO71 0.51 46.0 3.73e-01 100.0% 67.5%
4959619 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.51 43.0 3.47e-01 94.0% 47.6%
4238391 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 41.0 3.71e-01 88.1% 73.9%
3384789 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.51 42.0 3.91e-01 94.0% 92.7%
4243367 3561.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.51 42.0 2.75e-01 94.0% 25.2%
3296838 4099.1.1.14 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C 0.51 42.0 4.11e-01 98.8% 81.1%
5000791 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.51 42.0 3.81e-01 94.0% 70.0%