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JF937102.1__AEK09706.1__PBI_MOZY_92__00092
Bact-VirJF937102.1__AEK09706.1__PBI_MOZY_92__00092
Identity
- Accession:
- JF937102 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Taxonomy
TaxID: 2922213
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-133
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07463.17 best | NUMOD4 | 27.5 | 4.20e-06 | 53.3% | 95.9% |
| PF13392.13 | HNH_3 | 39.2 | 5.70e-10 | 38.1% | 78.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.86 | 70.0 | 6.99e-01 | 100.0% | 84.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 25.0 | 3.23e-01 | 88.6% | 67.9% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.55 | 49.0 | 4.26e-01 | 97.1% | 67.9% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 28.0 | 3.44e-01 | 72.4% | 85.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.51 | 35.0 | 3.23e-01 | 71.4% | 74.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.75 | 68.0 | 6.62e-01 | 99.0% | 87.8% |
| 3820607 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.69 | 31.0 | 3.84e-01 | 88.6% | 66.2% |
| 3987601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 31.0 | 4.12e-01 | 71.4% | 98.0% |
| 89916 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.56 | 49.0 | 4.27e-01 | 97.1% | 67.9% |
| 8233 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.55 | 49.0 | 4.26e-01 | 97.1% | 67.9% |
| 3821751 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.50 | 30.0 | 3.37e-01 | 71.4% | 77.5% |
| 4292696 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.50 | 28.0 | 3.19e-01 | 92.4% | 73.3% |