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JF974295.1__AGH57496.1__PSYG_00035__00035

Bact-Vir

JF974295.1__AGH57496.1__PSYG_00035__00035

Identity

Accession:
JF974295 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacter_phage_pOW20-A

TaxID: 754048

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-29_57-126
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06530.19 best Phage_antitermQ 40.6 3.00e-10 74.5% 55.9%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 58.0 7.00e-01 70.2% 98.4%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 57.0 6.77e-01 92.6% 95.4%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 59.0 5.70e-01 100.0% 62.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 6.73e-01 83.0% 93.8%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.79 54.0 4.79e-01 70.2% 67.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 5.60e-01 87.2% 81.2%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.74 65.0 5.49e-01 100.0% 59.9%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 51.0 5.13e-01 100.0% 72.3%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.68 52.0 4.52e-01 79.8% 91.5%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 49.0 5.03e-01 100.0% 80.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 54.0 4.17e-01 89.4% 60.7%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.71e-01 91.5% 90.9%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.62 52.0 4.61e-01 87.2% 88.8%
3gn4A00 6.10.220.10 Special › Helix non-globular › Helical scaffold and wing domains of SecA › 0.59 35.0 3.16e-01 95.7% 42.6%
4cgyA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.58 52.0 4.15e-01 100.0% 82.1%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 34.0 3.72e-01 97.9% 74.7%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 40.0 4.03e-01 75.5% 89.4%
1qmgA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 47.0 3.41e-01 100.0% 71.3%
2okuA00 1.20.120.470 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain 0.52 40.0 3.68e-01 100.0% 62.3%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 35.0 4.07e-01 95.7% 100.0%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4175748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 64.0 7.02e-01 73.4% 82.5%
4237551 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 61.0 6.14e-01 72.3% 68.4%
3163613 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 63.0 7.28e-01 72.3% 97.1%
3951829 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 62.0 6.60e-01 73.4% 78.8%
None — 0.89 58.0 5.45e-01 96.8% 56.4%
4683324 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.89 58.0 5.42e-01 96.8% 56.4%
3977260 101.1.1.39 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Phage_antitermQ 0.89 85.0 7.73e-01 100.0% 91.7%
3163616 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 61.0 6.13e-01 73.4% 70.2%
4303963 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 62.0 6.89e-01 76.6% 89.3%
4663875 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.89 62.0 4.46e-01 74.5% 28.3%
4520564 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 54.0 5.84e-01 71.3% 72.5%
4243530 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 56.0 6.73e-01 74.5% 93.8%
None — 0.88 59.0 5.63e-01 98.9% 61.0%
4032673 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 61.0 4.34e-01 73.4% 27.3%
4037682 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.88 58.0 5.74e-01 98.9% 64.0%
4388780 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.88 60.0 5.06e-01 72.3% 45.5%
None — 0.88 62.0 4.39e-01 84.0% 27.8%
3969641 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 56.0 6.06e-01 75.5% 76.2%
3284051 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.87 57.0 6.80e-01 72.3% 96.9%
3281471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 57.0 6.21e-01 75.5% 78.8%
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 59.0 6.95e-01 71.3% 100.0%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 60.0 6.51e-01 71.3% 85.0%
4165188 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 58.0 6.06e-01 71.3% 75.3%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.86 62.0 4.39e-01 83.0% 28.2%
None — 0.86 60.0 5.74e-01 98.9% 63.8%
3961841 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.86 58.0 6.66e-01 71.3% 92.9%
4470607 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.86 60.0 5.51e-01 98.9% 58.3%
3282225 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 59.0 6.44e-01 71.3% 85.0%
4205790 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 57.0 6.15e-01 71.3% 80.0%
3587538 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 59.0 6.96e-01 78.7% 98.5%
3955987 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 59.0 5.89e-01 76.6% 69.5%
3288090 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 60.0 6.88e-01 83.0% 97.1%
3959929 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 58.0 6.32e-01 70.2% 82.5%
4304581 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.85 58.0 5.86e-01 100.0% 70.2%
3288971 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.85 60.0 4.99e-01 73.4% 45.3%
3973360 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 59.0 6.78e-01 71.3% 97.1%
None — 0.85 60.0 5.61e-01 98.9% 61.8%
4439853 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 59.0 6.70e-01 76.6% 95.7%
4140444 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.85 59.0 5.60e-01 98.9% 61.8%
4289285 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 58.0 5.94e-01 70.2% 73.3%
None — 0.84 57.0 5.77e-01 98.9% 69.5%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 54.0 6.06e-01 70.2% 82.7%
4486973 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 59.0 6.23e-01 83.0% 80.0%
3971395 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 57.0 6.36e-01 70.2% 89.3%
4497189 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.83 56.0 6.73e-01 80.9% 100.0%
3971665 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 6.41e-01 71.3% 89.3%
3969325 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 57.0 6.59e-01 71.3% 95.7%
4146353 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.83 62.0 6.78e-01 83.0% 91.3%
3283863 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 58.0 5.97e-01 74.5% 75.6%
4233279 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.82 59.0 4.24e-01 73.4% 30.4%
4530655 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 59.0 5.76e-01 76.6% 69.0%
3284011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 58.0 6.70e-01 83.0% 98.6%
4202221 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 58.0 6.74e-01 84.0% 100.0%
3284984 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.82 58.0 4.15e-01 73.4% 27.2%
3587471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 59.0 5.31e-01 74.5% 69.1%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 58.0 4.16e-01 73.4% 27.6%
4336182 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 6.94e-01 98.9% 92.2%
3291331 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.81 61.0 6.62e-01 81.9% 91.3%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 56.0 6.58e-01 79.8% 100.0%
3974736 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 56.0 5.90e-01 71.3% 78.8%
3286778 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 58.0 6.62e-01 90.4% 98.6%
3284469 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 58.0 6.47e-01 83.0% 94.7%
3959868 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 55.0 6.13e-01 80.9% 89.3%
3283374 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 54.0 5.44e-01 71.3% 69.5%
3959876 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 60.0 5.88e-01 96.8% 74.0%
4372550 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 59.0 6.06e-01 86.2% 81.1%
4456068 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 63.0 6.17e-01 100.0% 79.0%
4043241 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 59.0 6.37e-01 83.0% 91.3%
3972713 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 61.0 6.08e-01 80.9% 85.3%
3961604 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 53.0 5.26e-01 71.3% 68.0%
4683276 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 55.0 5.55e-01 74.5% 74.7%
2817645 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 60.0 6.43e-01 100.0% 96.2%
3973709 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.80e-01 100.0% 74.3%
1810916 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.76 50.0 5.86e-01 97.9% 98.5%
2813289 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.75 51.0 5.06e-01 95.7% 67.0%
4279016 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.75 60.0 6.48e-01 86.2% 97.5%
3279339 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.75 57.0 4.47e-01 84.0% 40.5%
3967026 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 56.0 6.21e-01 80.9% 97.3%
5023952 101.1.2.888 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.74 47.0 5.50e-01 86.2% 87.1%
3587755 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 59.0 5.17e-01 81.9% 60.8%
3289947 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 56.0 6.07e-01 80.9% 93.8%
4862439 101.1.1.71 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.73 51.0 4.93e-01 100.0% 63.6%
4034281 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 66.0 6.29e-01 100.0% 88.2%
4396640 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 57.0 5.18e-01 88.3% 65.0%
4142399 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 51.0 5.22e-01 80.9% 77.8%
3967748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 57.0 5.96e-01 87.2% 98.8%
4129689 101.1.1.22 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PapB 0.67 50.0 5.42e-01 100.0% 93.7%
3627888 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.67 57.0 5.14e-01 100.0% 68.0%
4024517 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.67 56.0 5.23e-01 100.0% 73.0%
3589532 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 58.0 5.74e-01 97.9% 89.8%
3738852 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.66 56.0 5.04e-01 100.0% 68.0%
4577850 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.65 61.0 5.99e-01 100.0% 98.0%
3182958 101.1.1.64 ↗ alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.61 57.0 4.96e-01 100.0% 77.8%