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AGF91206.1
Arc-VirJF974305__AGF91206.1__HAPG-00020__00020
Identity
- Accession:
- JF974305 ↗
- Protein ID:
- AGF91206.1 ↗
- Kingdom:
- archaea
Quality
92.5
mean pLDDT
Taxonomy
TaxID: 889959
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-109
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 56.0 | 5.49e-01 | 79.0% | 87.4% |
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 28.0 | 3.52e-01 | 77.1% | 65.6% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 34.0 | 3.26e-01 | 78.1% | 41.6% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 40.0 | 4.59e-01 | 77.1% | 88.0% |
| 2ebiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 36.0 | 4.30e-01 | 78.1% | 90.9% |
| 1ni9A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.61 | 46.0 | 4.09e-01 | 79.0% | 70.2% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 27.0 | 3.36e-01 | 78.1% | 65.2% |
| 1vjhA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 37.0 | 3.53e-01 | 98.1% | 52.5% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.60 | 31.0 | 3.63e-01 | 78.1% | 70.4% |
| 4ak1A02 | 2.30.30.1270 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 3.92e-01 | 78.1% | 89.1% |
| 2x6hA02 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.56 | 47.0 | 4.17e-01 | 100.0% | 63.1% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 37.0 | 3.73e-01 | 70.5% | 84.4% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.53 | 36.0 | 3.41e-01 | 70.5% | 82.4% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.53 | 38.0 | 3.22e-01 | 74.3% | 69.9% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.52 | 37.0 | 3.10e-01 | 74.3% | 64.2% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.50 | 38.0 | 3.33e-01 | 81.0% | 63.4% |
| 5t89Y06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.66e-01 | 70.5% | 100.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966797 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.74 | 56.0 | 5.46e-01 | 79.0% | 91.3% |
| 5062717 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.73 | 55.0 | 5.39e-01 | 79.0% | 86.1% |
| 4083689 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.73 | 54.0 | 5.42e-01 | 79.0% | 86.2% |
| 4957572 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.69 | 62.0 | 5.76e-01 | 100.0% | 97.8% |
| 3966072 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.69 | 64.0 | 6.36e-01 | 99.0% | 98.1% |
| 4093240 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 34.0 | 4.50e-01 | 78.1% | 92.7% |
| 3914513 | 181.1.1.6 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PCM1_C | 0.67 | 48.0 | 4.73e-01 | 75.2% | 86.1% |
| 4433785 | 283.2.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GP46 | 0.66 | 59.0 | 5.54e-01 | 100.0% | 99.2% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.66 | 61.0 | 6.02e-01 | 100.0% | 99.1% |
| 5004672 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.65 | 59.0 | 5.65e-01 | 100.0% | 97.5% |
| 3854465 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.65 | 48.0 | 4.65e-01 | 78.1% | 77.5% |
| 3804346 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 39.0 | 4.67e-01 | 77.1% | 91.4% |
| 1518918 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.65 | 46.0 | 4.51e-01 | 73.3% | 69.6% |
| 4966305 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.64 | 48.0 | 5.08e-01 | 79.0% | 95.6% |
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.64 | 58.0 | 5.75e-01 | 100.0% | 97.2% |
| 3483288 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 47.0 | 4.40e-01 | 78.1% | 71.5% |
| 3965272 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.63 | 55.0 | 5.57e-01 | 96.2% | 100.0% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.62 | 44.0 | 4.43e-01 | 73.3% | 74.3% |
| 3968646 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.61 | 56.0 | 5.23e-01 | 100.0% | 94.6% |
| 3373065 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.61 | 45.0 | 3.02e-01 | 79.0% | 24.0% |
| 3408411 | 146.1.1.3 ↗ | alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain › Hemocyanin_M | 0.60 | 47.0 | 3.57e-01 | 83.8% | 94.7% |
| 3979092 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.60 | 55.0 | 5.34e-01 | 100.0% | 94.8% |
| 5044994 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.60 | 46.0 | 5.10e-01 | 95.2% | 100.0% |
| 3949098 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.60 | 45.0 | 4.43e-01 | 93.3% | 73.6% |
| 2589713 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.60 | 50.0 | 4.75e-01 | 92.4% | 84.0% |
| 3606311 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 32.0 | 3.69e-01 | 77.1% | 76.0% |
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.57 | 44.0 | 4.54e-01 | 93.3% | 86.0% |
| 3396511 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.56 | 41.0 | 4.34e-01 | 78.1% | 95.8% |
| 5067760 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.55 | 41.0 | 4.30e-01 | 100.0% | 91.1% |
| 4578663 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.55 | 27.0 | 3.15e-01 | 92.4% | 64.3% |
| 3668680 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.54 | 40.0 | 4.13e-01 | 77.1% | 87.0% |
| 3282266 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 37.0 | 3.71e-01 | 70.5% | 92.4% |
| 3362660 | 2003.1.2.150 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, GGR_cat | 0.53 | 41.0 | 2.79e-01 | 82.9% | 53.8% |
| 4111775 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.53 | 46.0 | 4.66e-01 | 100.0% | 97.1% |
| 3360687 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.51 | 39.0 | 3.44e-01 | 93.3% | 53.8% |
| 3261529 | 5.1.5.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N | 0.51 | 44.0 | 2.98e-01 | 95.2% | 95.1% |