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AGF91219.1

Arc-Vir

JF974305__AGF91219.1__HAPG-00033__00033

Identity

Accession:
JF974305 ↗
Protein ID:
AGF91219.1 ↗
Kingdom:
archaea

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-90
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 44.0 4.85e-01 70.7% 86.2%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 5.36e-01 94.7% 98.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 48.0 5.28e-01 85.3% 96.7%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 44.0 4.87e-01 70.7% 92.7%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.65 49.0 4.91e-01 82.7% 84.4%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.25e-01 93.3% 97.0%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 49.0 3.78e-01 84.0% 81.1%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 5.10e-01 90.7% 87.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 42.0 4.29e-01 70.7% 92.0%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.66e-01 72.0% 100.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 45.0 4.75e-01 77.3% 100.0%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 53.0 5.15e-01 98.7% 91.7%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.61 40.0 4.46e-01 70.7% 89.5%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.57e-01 73.3% 98.3%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.59 46.0 3.74e-01 88.0% 59.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 41.0 4.59e-01 72.0% 100.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.59 40.0 4.39e-01 70.7% 91.5%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 47.0 3.47e-01 88.0% 43.0%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 45.0 3.86e-01 84.0% 91.9%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 4.09e-01 88.0% 92.1%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 45.0 3.94e-01 85.3% 99.2%
1a0iA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.58 41.0 4.03e-01 86.7% 67.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.10e-01 76.0% 78.5%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 45.0 3.79e-01 85.3% 94.7%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.57 44.0 3.52e-01 86.7% 57.0%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 44.0 4.06e-01 88.0% 66.3%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.59e-01 86.7% 74.7%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 46.0 3.79e-01 90.7% 88.1%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.83e-01 89.3% 74.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 38.0 4.22e-01 72.0% 96.5%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.56 43.0 3.43e-01 88.0% 54.7%
3kalB05 3.30.1490.50 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain 0.56 36.0 3.92e-01 85.3% 84.7%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.55 43.0 3.68e-01 89.3% 72.9%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.55 44.0 3.83e-01 90.7% 68.0%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 42.0 3.37e-01 85.3% 76.9%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 3.63e-01 89.3% 97.6%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 41.0 3.17e-01 86.7% 85.3%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.59e-01 73.3% 71.2%
5jcvA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.52 39.0 3.06e-01 82.7% 57.7%
3afhA02 3.90.800.10 Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 0.51 35.0 3.17e-01 88.0% 51.0%
1ng5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.51 37.0 2.76e-01 77.3% 62.6%
4ux7A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.50 38.0 2.86e-01 82.7% 51.5%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 68.0 7.51e-01 82.7% 100.0%
4950992 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.77 62.0 6.15e-01 86.7% 88.7%
5040888 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.77 62.0 6.08e-01 85.3% 86.3%
4969566 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.77 61.0 6.01e-01 85.3% 87.5%
3590784 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.75 51.0 5.46e-01 85.3% 81.5%
4169657 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.74 48.0 5.62e-01 81.3% 98.0%
4034320 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.73 57.0 6.01e-01 84.0% 95.6%
4182977 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.73 48.0 5.24e-01 85.3% 83.3%
5004476 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 49.0 5.19e-01 80.0% 80.0%
4999705 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.73 60.0 5.58e-01 90.7% 77.9%
5047239 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.92e-01 84.0% 96.9%
4975764 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.72 52.0 5.39e-01 88.0% 82.9%
4010681 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 57.0 5.25e-01 85.3% 67.4%
5077969 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.60e-01 85.3% 81.2%
4302391 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.72 56.0 5.92e-01 84.0% 100.0%
4534931 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.72 47.0 4.72e-01 84.0% 66.7%
4208040 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 55.0 5.57e-01 84.0% 84.9%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.71 55.0 5.24e-01 84.0% 73.3%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.38e-01 84.0% 88.2%
4122525 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 54.0 5.46e-01 84.0% 82.7%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.64e-01 82.7% 93.7%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 53.0 5.39e-01 84.0% 82.2%
4084850 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 53.0 5.57e-01 84.0% 92.3%
4505797 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 53.0 5.61e-01 84.0% 92.3%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.70 55.0 5.24e-01 86.7% 77.8%
4205717 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.13e-01 84.0% 75.0%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.50e-01 84.0% 92.3%
4584943 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 51.0 5.31e-01 84.0% 85.7%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.66e-01 84.0% 95.4%
4429329 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 52.0 5.47e-01 82.7% 92.3%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 51.0 5.20e-01 84.0% 82.2%
4269844 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 52.0 5.40e-01 84.0% 88.6%
3387119 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.69 56.0 5.32e-01 90.7% 75.6%
4347922 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 50.0 5.46e-01 82.7% 98.3%
4216845 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 51.0 5.16e-01 84.0% 82.2%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 53.0 5.35e-01 84.0% 85.3%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 51.0 5.13e-01 84.0% 80.0%
3290160 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.68 55.0 5.45e-01 88.0% 85.0%
3190835 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.68 49.0 4.77e-01 84.0% 68.2%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 51.0 5.30e-01 84.0% 88.4%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 51.0 5.40e-01 84.0% 93.8%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.51e-01 86.7% 94.3%
4574546 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 51.0 5.43e-01 84.0% 95.4%
4139778 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 5.09e-01 84.0% 83.6%
4264671 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 50.0 4.96e-01 84.0% 76.2%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.66 51.0 5.06e-01 84.0% 80.5%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 50.0 5.16e-01 84.0% 87.1%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.66 57.0 5.18e-01 96.0% 78.0%
4118226 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.06e-01 82.7% 85.7%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 48.0 5.10e-01 84.0% 92.3%
4088209 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 49.0 5.21e-01 84.0% 93.8%
3199259 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.65 48.0 5.11e-01 86.7% 90.8%
3990857 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 48.0 5.17e-01 84.0% 98.3%
3476478 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.04e-01 82.7% 54.7%
4927532 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.65 50.0 4.26e-01 84.0% 58.4%
3593222 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.91e-01 85.3% 96.3%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 44.0 3.48e-01 89.3% 34.8%
632 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.63 51.0 4.96e-01 92.0% 82.6%
3967527 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.62 49.0 3.85e-01 88.0% 56.2%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.62 46.0 4.60e-01 84.0% 77.3%
4004815 4.1.1.166 beta barrels › SH3 › SH3 › SH3 › DUF2314 0.61 48.0 4.10e-01 85.3% 70.7%
5018908 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 48.0 3.97e-01 85.3% 90.4%
3195050 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 44.0 4.14e-01 85.3% 62.1%
3236689 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.64e-01 84.0% 100.0%
4380236 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.60 46.0 3.61e-01 86.7% 53.1%
154312 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.60 44.0 4.51e-01 85.3% 84.3%
4300895 4.11.1.6 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.59 46.0 3.76e-01 84.0% 50.0%
3405627 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 41.0 3.88e-01 82.7% 58.9%
3502388 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.39e-01 88.0% 80.0%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 38.0 4.39e-01 98.7% 100.0%
3768346 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.58 45.0 4.58e-01 85.3% 86.7%
3511375 4.1.1.349 beta barrels › SH3 › SH3 › SH3 › ROF 0.58 46.0 4.44e-01 88.0% 80.0%
1758949 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.58 45.0 3.79e-01 86.7% 69.1%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.61e-01 89.3% 96.9%
3786448 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.57 47.0 3.01e-01 90.7% 52.5%
7765 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.57 44.0 3.84e-01 88.0% 74.6%
2663669 4216.1.1.2 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.56 43.0 3.53e-01 88.0% 58.7%
3242544 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.28e-01 72.0% 68.5%
3740221 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.56 42.0 3.40e-01 84.0% 55.0%
3402422 221.1.1.112 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 0.55 47.0 4.22e-01 100.0% 100.0%
3520654 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.54 45.0 3.61e-01 93.3% 52.7%
3387649 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.53 40.0 3.42e-01 85.3% 91.1%
81581 880.1.1.1 a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.52 40.0 2.65e-01 89.3% 54.5%
3878271 101.1.2.284 alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.52 43.0 3.46e-01 93.3% 49.7%
3170371 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.51 40.0 3.49e-01 88.0% 75.0%
3222177 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 42.0 3.98e-01 96.0% 91.4%