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JF974307.1__AGH58003.1__RHVG_00038__00038
Bact-VirJF974307.1__AGH58003.1__RHVG_00038__00038
Identity
- Accession:
- JF974307 ↗
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-73
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fjrA01 | 2.30.160.11 | Mainly Beta › Roll › Methuselah Ectodomain; Chain: A, domain 1 › | 0.57 | 29.0 | 2.88e-01 | 86.2% | 44.4% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 48.0 | 3.12e-01 | 100.0% | 87.4% |
| 3b6hA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 41.0 | 2.47e-01 | 94.8% | 11.5% |
| 1vm8B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 45.0 | 2.67e-01 | 100.0% | 75.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4160692 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.61 | 36.0 | 2.49e-01 | 89.7% | 15.1% |
| 4121124 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 52.0 | 3.35e-01 | 98.3% | 86.9% |
| 4212184 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.58 | 48.0 | 3.30e-01 | 100.0% | 74.7% |
| 3832498 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.57 | 42.0 | 2.93e-01 | 81.0% | 76.7% |
| 3210795 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.57 | 46.0 | 3.14e-01 | 100.0% | 77.4% |
| 3942393 | 2004.1.1.173 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TrwB_AAD_bind | 0.56 | 41.0 | 2.51e-01 | 81.0% | 10.6% |
| 5045979 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.53 | 45.0 | 2.93e-01 | 94.8% | 63.7% |
| 4923851 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.52 | 44.0 | 3.25e-01 | 93.1% | 74.4% |
| 3238872 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.52 | 41.0 | 2.99e-01 | 91.4% | 80.5% |