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JF974314.1__AGN34424.1__RHXG_00048__00048

Bact-Vir

JF974314.1__AGN34424.1__RHXG_00048__00048

Identity

Accession:
JF974314 ↗
Kingdom:
phage

Quality

86.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-86
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 62.0 7.22e-01 83.7% 95.2%
5u8kA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 77.0 7.07e-01 100.0% 89.7%
7lzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 75.0 7.44e-01 98.8% 100.0%
3q9vA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.69e-01 94.2% 92.9%
3boqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 4.70e-01 90.7% 46.7%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 6.12e-01 97.7% 76.5%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 5.90e-01 86.0% 86.3%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 6.22e-01 86.0% 86.9%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 70.0 6.91e-01 100.0% 96.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.18e-01 87.2% 63.5%
2hqrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 68.0 6.34e-01 100.0% 91.5%
4b09B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 69.0 6.64e-01 100.0% 93.9%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.64e-01 84.9% 82.5%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 6.53e-01 100.0% 100.0%
1i27A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.51e-01 82.6% 86.3%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 6.43e-01 96.5% 98.8%
7jv7B01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 57.0 4.83e-01 86.0% 60.3%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.89e-01 86.0% 89.2%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.75e-01 84.9% 98.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.13e-01 84.9% 73.9%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.69 52.0 5.71e-01 84.9% 98.6%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.82e-01 98.8% 95.3%
2xubA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 61.0 5.98e-01 98.8% 94.6%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.68 53.0 5.47e-01 83.7% 91.4%
2k4jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.54e-01 98.8% 89.5%
3euhD01 1.10.10.2250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 46.0 4.95e-01 86.0% 88.6%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 5.86e-01 98.8% 98.9%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 44.0 4.93e-01 81.4% 98.3%
3himA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 50.0 3.85e-01 84.9% 82.6%
2yi9A05 1.20.1270.270 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain 0.61 35.0 3.73e-01 83.7% 62.3%
4f0zB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 42.0 3.53e-01 100.0% 40.6%
1rq5A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.60 46.0 2.87e-01 83.7% 15.1%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.23e-01 82.6% 84.8%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 44.0 4.77e-01 84.9% 98.6%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 49.0 4.14e-01 96.5% 85.1%
1icrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.57 49.0 3.76e-01 100.0% 76.4%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 49.0 4.13e-01 96.5% 86.3%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 48.0 4.12e-01 97.7% 89.1%
3mzvA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 49.0 3.43e-01 100.0% 53.1%
3ubcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 47.0 4.20e-01 96.5% 88.5%
3eslA01 1.20.58.2070 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 37.0 3.86e-01 88.4% 77.3%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.55 37.0 3.56e-01 70.9% 93.3%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.55 42.0 4.02e-01 84.9% 92.3%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.54 42.0 3.37e-01 86.0% 48.7%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.54 47.0 3.94e-01 100.0% 86.5%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 45.0 3.94e-01 96.5% 87.9%
3zuxA00 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.53 41.0 2.88e-01 84.9% 71.1%
2eucA00 1.10.8.570 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB 0.53 42.0 3.94e-01 96.5% 70.1%
1tzvA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.52 42.0 3.69e-01 94.2% 63.8%
2kzcA00 1.10.790.20 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Domain of unknown function DUF1476 0.52 38.0 3.86e-01 79.1% 95.3%
3qz0A00 6.10.250.2300 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 41.0 4.29e-01 100.0% 97.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4615793 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.95 70.0 6.91e-01 86.0% 72.2%
3590781 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.94 69.0 6.80e-01 84.9% 72.2%
4034263 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.93 66.0 6.72e-01 83.7% 74.1%
3588023 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.93 67.0 6.99e-01 84.9% 80.0%
4395674 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.92 67.0 6.75e-01 84.9% 75.3%
4032391 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.92 67.0 6.80e-01 86.0% 76.5%
4032395 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.91 66.0 6.51e-01 84.9% 71.1%
4034249 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.91 68.0 6.75e-01 87.2% 74.4%
3588536 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.91 67.0 7.00e-01 87.2% 82.5%
4614033 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.90 63.0 6.54e-01 84.9% 77.5%
3943350 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.90 66.0 6.63e-01 88.4% 76.5%
4557681 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.89 66.0 6.86e-01 87.2% 82.5%
3980266 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.87 62.0 5.96e-01 83.7% 66.3%
3989154 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 62.0 6.49e-01 84.9% 80.0%
3587302 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 62.0 6.40e-01 84.9% 80.0%
3979499 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.85 80.0 7.73e-01 100.0% 97.9%
3590776 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.84 59.0 5.74e-01 83.7% 66.3%
4593019 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.82 76.0 6.98e-01 98.8% 89.0%
3980467 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.82 76.0 6.97e-01 98.8% 89.0%
4030984 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.82 58.0 6.02e-01 83.7% 78.8%
4232905 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.82 77.0 7.02e-01 100.0% 93.6%
4161299 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.81 76.0 7.18e-01 100.0% 97.0%
5051503 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.81 60.0 5.67e-01 88.4% 66.0%
3503087 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.81 75.0 6.82e-01 98.8% 88.2%
3518101 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.81 75.0 7.09e-01 98.8% 100.0%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.81 59.0 6.10e-01 83.7% 81.2%
3949050 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.81 74.0 6.56e-01 98.8% 81.7%
3969535 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 73.0 6.65e-01 98.8% 89.1%
4026717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 59.0 6.46e-01 83.7% 95.7%
3590622 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.78 56.0 5.22e-01 84.9% 61.0%
4473370 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 62.0 6.62e-01 83.7% 98.7%
3985577 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.78 71.0 6.32e-01 98.8% 83.9%
3973953 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.78 71.0 6.71e-01 98.8% 97.0%
3972517 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.77 71.0 6.47e-01 98.8% 92.7%
3905943 101.1.2.107 alpha arrays › HTH › HTH › winged helix domain › STN1_2 0.75 60.0 6.45e-01 84.9% 98.6%
3964016 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 5.40e-01 100.0% 53.8%
4961794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.16e-01 84.9% 65.6%
4939370 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 6.10e-01 95.3% 85.0%
5014943 101.1.2.925 alpha arrays › HTH › HTH › winged helix domain › DUF7344 0.72 61.0 5.06e-01 91.9% 53.8%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.82e-01 87.2% 84.4%
3236724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 5.36e-01 84.9% 71.4%
3547233 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.72 59.0 4.64e-01 91.9% 70.0%
3499387 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.71 54.0 5.01e-01 84.9% 63.6%
3262459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.80e-01 96.5% 99.0%
4024318 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 5.68e-01 84.9% 88.2%
3246949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.76e-01 84.9% 95.0%
5068497 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.70 61.0 5.43e-01 100.0% 68.6%
4025053 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.70 55.0 5.36e-01 86.0% 90.5%
3214912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.17e-01 83.7% 74.0%
5045172 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.69 53.0 3.61e-01 86.0% 22.9%
4933807 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 53.0 5.40e-01 84.9% 90.6%
3426634 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.67 51.0 5.18e-01 83.7% 82.4%
3441807 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 52.0 5.25e-01 86.0% 90.6%
3744259 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.66 51.0 4.49e-01 84.9% 55.4%
3938065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 5.40e-01 84.9% 94.7%
3272642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 60.0 5.80e-01 100.0% 94.7%
5065435 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.45e-01 84.9% 97.3%
3695289 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 52.0 4.39e-01 88.4% 55.9%
3376263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 51.0 5.12e-01 84.9% 88.2%
3598088 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.64 54.0 4.79e-01 100.0% 63.8%
4972260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 5.31e-01 95.3% 87.4%
4506962 101.1.1.51 alpha arrays › HTH › HTH › Three-helical HTH › Slx4 0.62 41.0 4.34e-01 81.4% 77.3%
3225058 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.62 52.0 3.51e-01 93.0% 31.4%
5049282 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 5.09e-01 96.5% 95.3%
3165861 5051.1.1.1 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF 0.60 41.0 2.64e-01 70.9% 59.6%
4465167 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.59 49.0 4.62e-01 95.3% 97.3%
4966900 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.59 41.0 4.60e-01 96.5% 96.9%
4110582 140.1.1.14 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e 0.59 36.0 2.83e-01 100.0% 27.3%
5019976 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 47.0 3.60e-01 95.3% 58.7%
4983336 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.52 44.0 3.29e-01 97.7% 64.4%
4015684 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.51 40.0 2.55e-01 88.4% 44.7%