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JF974314.1__AGN34433.1__RHXG_00057__00057
Bact-VirJF974314.1__AGN34433.1__RHXG_00057__00057
Identity
- Accession:
- JF974314 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-114
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eqzB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 48.0 | 4.58e-01 | 76.9% | 95.2% |
| 1lj8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 47.0 | 3.54e-01 | 79.6% | 89.4% |
| 3v4cA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.63 | 45.0 | 3.74e-01 | 73.1% | 97.9% |
| 2a3nA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 48.0 | 4.25e-01 | 82.4% | 77.8% |
| 2a3nA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 49.0 | 4.29e-01 | 83.3% | 76.4% |
| 1bvyF00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.62 | 45.0 | 4.07e-01 | 75.9% | 94.7% |
| 5uqiA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 49.0 | 4.07e-01 | 84.3% | 71.8% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.61 | 44.0 | 4.10e-01 | 75.0% | 73.0% |
| 3hebA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 43.0 | 3.97e-01 | 74.1% | 93.0% |
| 1moqA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 48.0 | 3.83e-01 | 86.1% | 65.1% |
| 2pv0A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 45.0 | 3.72e-01 | 80.6% | 93.1% |
| 2vq3A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 46.0 | 3.90e-01 | 83.3% | 86.7% |
| 2yvqA00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.59 | 44.0 | 4.13e-01 | 78.7% | 83.6% |
| 2abwA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.59 | 43.0 | 3.48e-01 | 77.8% | 88.9% |
| 1xvxA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 41.0 | 3.67e-01 | 73.1% | 74.2% |
| 1d9yA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 41.0 | 3.65e-01 | 73.1% | 77.8% |
| 4rxlA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 41.0 | 3.99e-01 | 73.1% | 79.5% |
| 1sbzD00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.58 | 43.0 | 3.70e-01 | 80.6% | 97.3% |
| 1jg7A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 45.0 | 3.86e-01 | 85.2% | 91.3% |
| 4bucA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 45.0 | 3.72e-01 | 85.2% | 90.2% |
| 5e5bA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.57 | 42.0 | 3.69e-01 | 78.7% | 81.3% |
| 2hxwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 40.0 | 3.95e-01 | 75.0% | 81.4% |
| 2xvyA01 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 3.64e-01 | 72.2% | 96.4% |
| 3ec7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 39.0 | 3.15e-01 | 71.3% | 77.5% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 38.0 | 3.58e-01 | 72.2% | 92.7% |
| 7u35A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 38.0 | 4.10e-01 | 72.2% | 100.0% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 38.0 | 4.01e-01 | 72.2% | 88.7% |
| 2ynmC03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 43.0 | 4.18e-01 | 86.1% | 85.4% |
| 3nbmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 39.0 | 4.02e-01 | 75.9% | 89.4% |
| 2xdqA03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 42.0 | 4.07e-01 | 85.2% | 82.3% |
| 4cujA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 38.0 | 3.55e-01 | 73.1% | 91.7% |
| 2qsjB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 3.67e-01 | 73.1% | 90.2% |
| 2hoxA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 40.0 | 3.22e-01 | 78.7% | 97.1% |
| 2z1dA01 | 3.40.50.11750 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HypD, alpha/beta domain 1 | 0.52 | 36.0 | 3.38e-01 | 72.2% | 66.0% |
| 4k28A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 36.0 | 3.34e-01 | 72.2% | 81.0% |
| 1q14A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.51 | 41.0 | 3.52e-01 | 88.9% | 80.1% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4038369 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.63 | 46.0 | 4.26e-01 | 75.0% | 83.0% |
| 1942521 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.62 | 45.0 | 3.66e-01 | 75.0% | 90.8% |
| 3944693 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.62 | 47.0 | 4.10e-01 | 79.6% | 71.5% |
| 5071930 | 2003.1.10.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RLAN | 0.60 | 41.0 | 4.73e-01 | 74.1% | 98.7% |
| 3955019 | 2003.1.1.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › XdhC_C | 0.59 | 41.0 | 3.81e-01 | 72.2% | 87.1% |
| 5022709 | 2007.13.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit | 0.59 | 44.0 | 3.72e-01 | 79.6% | 97.8% |
| 4014148 | 2003.1.14.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase | 0.58 | 47.0 | 4.19e-01 | 90.7% | 97.0% |
| 3744883 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 40.0 | 3.70e-01 | 74.1% | 89.7% |
| 2095415 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.57 | 39.0 | 3.45e-01 | 70.4% | 55.6% |
| 4950176 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.56 | 40.0 | 3.40e-01 | 74.1% | 81.6% |
| 4149509 | 7543.1.1.0 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like | 0.56 | 40.0 | 3.98e-01 | 75.9% | 77.4% |
| 3588366 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.54 | 38.0 | 4.06e-01 | 72.2% | 96.8% |
| 4177283 | 2004.1.1.422 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, RsgA_GTPase | 0.54 | 44.0 | 3.52e-01 | 92.6% | 82.1% |
| 3374069 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.54 | 39.0 | 3.79e-01 | 77.8% | 100.0% |
| 3609673 | 109.4.1.1201 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RESC6 | 0.53 | 38.0 | 2.54e-01 | 75.9% | 18.2% |
| 4105867 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 43.0 | 3.30e-01 | 88.9% | 63.2% |
| 4054867 | 2003.1.8.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N | 0.52 | 38.0 | 3.89e-01 | 75.9% | 93.3% |
| 4621622 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.52 | 42.0 | 3.37e-01 | 88.0% | 96.4% |
| 4451035 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 41.0 | 3.51e-01 | 85.2% | 83.3% |
| 4466386 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.51 | 36.0 | 2.82e-01 | 74.1% | 98.9% |
| 4988052 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.51 | 36.0 | 3.80e-01 | 75.0% | 81.0% |