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JF974315.1__AGN38689.1__RHYG_00020__00020
Bact-VirJF974315.1__AGN38689.1__RHYG_00020__00020
Identity
- Accession:
- JF974315 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-66_155-215
Domain cluster:
rep: KF614509.1__AHC30463.1__L338C_046__00046__D3-88
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 36.0 | 3.99e-01 | 82.6% | 75.5% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.59 | 51.0 | 4.65e-01 | 93.4% | 87.0% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 35.0 | 3.65e-01 | 85.1% | 64.6% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 49.0 | 4.48e-01 | 94.2% | 87.3% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 35.0 | 3.63e-01 | 81.8% | 66.1% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 35.0 | 3.68e-01 | 87.6% | 67.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 34.0 | 3.69e-01 | 82.6% | 72.8% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 35.0 | 3.79e-01 | 84.3% | 79.4% |
| 2rp5A00 | 1.10.150.830 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 41.0 | 4.18e-01 | 91.7% | 83.8% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 33.0 | 3.58e-01 | 82.6% | 73.7% |
| 4bg5B00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.52 | 37.0 | 3.23e-01 | 74.4% | 81.4% |
| 1ynbA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 37.0 | 3.33e-01 | 74.4% | 93.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904155 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 37.0 | 4.41e-01 | 87.6% | 90.0% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 36.0 | 3.69e-01 | 85.1% | 64.3% |
| 3210541 | 611.7.1.9 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › SesA | 0.57 | 32.0 | 2.92e-01 | 100.0% | 41.2% |
| 1276701 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 38.0 | 3.74e-01 | 71.1% | 86.2% |
| 3582614 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.53 | 38.0 | 3.65e-01 | 73.6% | 82.1% |
| 3897972 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 33.0 | 3.95e-01 | 92.6% | 100.0% |
| 167064 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.52 | 34.0 | 3.27e-01 | 93.4% | 53.4% |
| 4452635 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.52 | 41.0 | 3.75e-01 | 85.1% | 94.5% |
| 3433531 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 36.0 | 3.43e-01 | 71.1% | 79.3% |
| 3786679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 29.0 | 2.82e-01 | 90.9% | 47.9% |
| 4280250 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.50 | 40.0 | 3.69e-01 | 87.6% | 99.4% |
| 4568881 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.50 | 40.0 | 3.69e-01 | 87.6% | 97.0% |
D2
high
residues 67-148
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00182.25 best | Glyco_hydro_19 | 34.5 | 2.60e-08 | 87.8% | 20.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvuB02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.75 | 64.0 | 4.69e-01 | 100.0% | 37.8% |
| 2cjlA02 | 3.30.20.10 | Alpha Beta › 2-Layer Sandwich › Endochitinase; domain 2 › Endochitinase, domain 2 | 0.70 | 51.0 | 5.88e-01 | 85.4% | 100.0% |
| 2z39A02 | 3.30.20.10 | Alpha Beta › 2-Layer Sandwich › Endochitinase; domain 2 › Endochitinase, domain 2 | 0.70 | 49.0 | 5.74e-01 | 85.4% | 100.0% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 31.0 | 3.23e-01 | 78.0% | 56.4% |
| 1iyhB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 30.0 | 2.75e-01 | 85.4% | 41.7% |
| 4k05A02 | 3.90.1150.140 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.50 | 29.0 | 2.37e-01 | 90.2% | 28.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4132757 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.84 | 57.0 | 4.33e-01 | 100.0% | 32.9% |
| 4153903 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.75 | 62.0 | 4.32e-01 | 100.0% | 30.2% |
| 3417578 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.75 | 62.0 | 4.25e-01 | 100.0% | 28.4% |
| 1147708 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.75 | 70.0 | 5.04e-01 | 100.0% | 53.4% |
| 159294 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.75 | 64.0 | 4.60e-01 | 100.0% | 35.4% |
| 3824608 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.74 | 63.0 | 4.18e-01 | 100.0% | 26.1% |
| 3973873 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.74 | 69.0 | 4.97e-01 | 100.0% | 51.7% |
| 3647235 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.73 | 62.0 | 5.09e-01 | 100.0% | 54.1% |
| 4860579 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.73 | 68.0 | 5.01e-01 | 100.0% | 57.7% |
| 4821783 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.72 | 68.0 | 5.08e-01 | 100.0% | 59.1% |
| 59082 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.51 | 30.0 | 2.63e-01 | 82.9% | 37.1% |
D3
high
residues 227-273