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JF974315.1__AGN38713.1__RHYG_00044__00044
Bact-VirJF974315.1__AGN38713.1__RHYG_00044__00044
Identity
- Accession:
- JF974315 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-83
Domain cluster:
rep: CAKLQH020000005.1__CAH1078703.1__SAMEA5780036_01077__00062__D8-71
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 66.0 | 6.98e-01 | 100.0% | 90.2% |
| 3d31A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.86 | 55.0 | 6.57e-01 | 100.0% | 97.8% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.86 | 79.0 | 7.28e-01 | 100.0% | 79.8% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 47.0 | 4.99e-01 | 100.0% | 61.3% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.83 | 64.0 | 6.87e-01 | 100.0% | 94.9% |
| 3pqiA01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.82 | 74.0 | 6.99e-01 | 98.6% | 97.6% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 44.0 | 5.07e-01 | 100.0% | 73.5% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 55.0 | 5.70e-01 | 84.1% | 75.0% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 51.0 | 6.18e-01 | 79.7% | 100.0% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 64.0 | 6.55e-01 | 100.0% | 88.1% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 68.0 | 6.45e-01 | 100.0% | 79.7% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 67.0 | 6.57e-01 | 100.0% | 86.3% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.78 | 55.0 | 5.49e-01 | 84.1% | 71.8% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.77 | 61.0 | 5.91e-01 | 100.0% | 75.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 52.0 | 5.49e-01 | 84.1% | 78.7% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 48.0 | 5.77e-01 | 79.7% | 100.0% |
| 2bh8B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 55.0 | 5.99e-01 | 81.2% | 96.4% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 50.0 | 5.83e-01 | 79.7% | 98.0% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 63.0 | 6.00e-01 | 100.0% | 80.0% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 61.0 | 5.29e-01 | 100.0% | 60.8% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 65.0 | 6.00e-01 | 100.0% | 84.3% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 61.0 | 6.04e-01 | 100.0% | 86.5% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 66.0 | 5.91e-01 | 100.0% | 80.0% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 39.0 | 4.20e-01 | 100.0% | 60.0% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 62.0 | 5.45e-01 | 100.0% | 65.7% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 65.0 | 5.64e-01 | 100.0% | 72.1% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 57.0 | 5.57e-01 | 98.6% | 78.7% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 47.0 | 4.68e-01 | 85.5% | 64.4% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 63.0 | 5.88e-01 | 98.6% | 94.3% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 52.0 | 4.89e-01 | 92.8% | 63.9% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.71 | 52.0 | 5.15e-01 | 87.0% | 74.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.70 | 56.0 | 5.69e-01 | 88.4% | 86.6% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 60.0 | 4.94e-01 | 100.0% | 52.8% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 61.0 | 5.68e-01 | 97.1% | 90.8% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 60.0 | 5.70e-01 | 97.1% | 81.2% |
| 3psiA06 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 61.0 | 5.42e-01 | 98.6% | 70.0% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 58.0 | 5.74e-01 | 98.6% | 87.8% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.69 | 50.0 | 5.39e-01 | 100.0% | 91.4% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 61.0 | 5.29e-01 | 100.0% | 70.6% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 62.0 | 4.88e-01 | 100.0% | 55.3% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 61.0 | 5.55e-01 | 100.0% | 87.2% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.68 | 51.0 | 5.39e-01 | 100.0% | 93.2% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 61.0 | 5.12e-01 | 100.0% | 63.8% |
| 3kf6A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 60.0 | 4.77e-01 | 100.0% | 55.1% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 58.0 | 4.90e-01 | 100.0% | 59.3% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.65 | 58.0 | 5.70e-01 | 100.0% | 92.0% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 57.0 | 4.57e-01 | 100.0% | 55.3% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 51.0 | 4.65e-01 | 85.5% | 90.2% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.64 | 58.0 | 5.69e-01 | 100.0% | 95.9% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 57.0 | 5.22e-01 | 100.0% | 79.1% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 57.0 | 5.17e-01 | 100.0% | 78.3% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 55.0 | 5.49e-01 | 98.6% | 100.0% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 54.0 | 4.36e-01 | 100.0% | 57.0% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 42.0 | 4.48e-01 | 84.1% | 84.5% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 4.38e-01 | 100.0% | 54.1% |
| 2qgqA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 48.0 | 5.10e-01 | 100.0% | 100.0% |
| 3csqA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.61 | 49.0 | 3.75e-01 | 89.9% | 61.0% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 53.0 | 4.26e-01 | 100.0% | 58.4% |
| 1ty0A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 50.0 | 4.92e-01 | 100.0% | 94.7% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 51.0 | 4.92e-01 | 100.0% | 91.0% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 41.0 | 2.88e-01 | 73.9% | 41.5% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 51.0 | 4.64e-01 | 95.7% | 91.0% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 47.0 | 4.23e-01 | 100.0% | 69.8% |
| 5fkaC02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 48.0 | 4.61e-01 | 100.0% | 92.5% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 43.0 | 3.86e-01 | 91.3% | 96.2% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.54 | 42.0 | 4.38e-01 | 98.6% | 100.0% |
| 5gvyA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.52 | 44.0 | 3.60e-01 | 100.0% | 85.5% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.51 | 43.0 | 3.16e-01 | 98.6% | 82.8% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980538 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.99 | 95.0 | 9.19e-01 | 100.0% | 92.0% |
| 3946740 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.89 | 81.0 | 7.31e-01 | 100.0% | 74.4% |
| 1731165 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.89 | 80.0 | 7.28e-01 | 100.0% | 75.3% |
| 4285716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.87 | 57.0 | 6.68e-01 | 91.3% | 94.0% |
| 3948035 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.87 | 79.0 | 5.57e-01 | 100.0% | 51.5% |
| 185474 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.82 | 75.0 | 6.90e-01 | 100.0% | 93.1% |
| 4988106 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 72.0 | 6.28e-01 | 100.0% | 85.0% |
| 4532614 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.77 | 64.0 | 6.60e-01 | 100.0% | 93.8% |
| 1513775 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 55.0 | 5.50e-01 | 88.4% | 73.6% |
| 4623446 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 60.0 | 4.83e-01 | 87.0% | 46.8% |
| 4079201 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 53.0 | 4.51e-01 | 89.9% | 46.4% |
| 4977527 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.75 | 63.0 | 6.56e-01 | 100.0% | 98.4% |
| 3320905 | 2.1.1.265 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RRP5 | 0.75 | 68.0 | 5.95e-01 | 100.0% | 72.0% |
| 5035454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 66.0 | 6.43e-01 | 97.1% | 93.3% |
| 4654307 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.74 | 65.0 | 6.47e-01 | 98.6% | 92.9% |
| 3592532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 66.0 | 6.17e-01 | 98.6% | 84.7% |
| 3589665 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.74 | 64.0 | 6.29e-01 | 100.0% | 88.0% |
| 5057705 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.74 | 66.0 | 6.00e-01 | 98.6% | 80.0% |
| 3698598 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 66.0 | 6.12e-01 | 98.6% | 84.7% |
| 4606649 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 63.0 | 6.44e-01 | 100.0% | 95.6% |
| 5030089 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.73 | 66.0 | 6.33e-01 | 100.0% | 92.5% |
| 168736 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.73 | 61.0 | 6.30e-01 | 100.0% | 97.0% |
| 4961575 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 53.0 | 4.28e-01 | 87.0% | 42.4% |
| 1567587 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.72 | 53.0 | 5.32e-01 | 88.4% | 76.1% |
| 1509336 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 54.0 | 5.35e-01 | 88.4% | 75.3% |
| 3624794 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 65.0 | 5.96e-01 | 100.0% | 81.1% |
| 4083610 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.72 | 60.0 | 6.18e-01 | 97.1% | 95.4% |
| 4966133 | 2.1.1.377 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF25948 | 0.72 | 61.0 | 4.34e-01 | 100.0% | 32.0% |
| 3628127 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.72 | 64.0 | 5.35e-01 | 100.0% | 60.8% |
| 3561240 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.72 | 65.0 | 5.57e-01 | 98.6% | 81.0% |
| 3970503 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 56.0 | 4.46e-01 | 89.9% | 44.2% |
| 1524863 | 2.4.1.7 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK | 0.72 | 55.0 | 5.07e-01 | 89.9% | 65.1% |
| 4236900 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.71 | 57.0 | 4.59e-01 | 87.0% | 45.7% |
| 3899838 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.71 | 64.0 | 5.51e-01 | 98.6% | 81.0% |
| 3619972 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 61.0 | 6.15e-01 | 100.0% | 94.3% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 60.0 | 6.22e-01 | 100.0% | 98.5% |
| 4536756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 63.0 | 5.83e-01 | 97.1% | 78.8% |
| 136897 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.71 | 65.0 | 5.88e-01 | 100.0% | 80.4% |
| 3369392 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 63.0 | 5.54e-01 | 98.6% | 75.0% |
| 3227100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 58.0 | 5.65e-01 | 100.0% | 82.7% |
| 3527706 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 63.0 | 5.05e-01 | 100.0% | 54.1% |
| 3808583 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.70 | 63.0 | 5.76e-01 | 98.6% | 76.7% |
| 3591158 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 63.0 | 5.14e-01 | 100.0% | 64.8% |
| 3702421 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 62.0 | 5.28e-01 | 98.6% | 69.1% |
| 5043225 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.70 | 63.0 | 5.85e-01 | 100.0% | 87.1% |
| 4572080 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 62.0 | 5.77e-01 | 98.6% | 83.5% |
| 4090273 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 62.0 | 5.38e-01 | 98.6% | 67.3% |
| 4167417 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 62.0 | 5.75e-01 | 98.6% | 80.0% |
| 4314982 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 62.0 | 5.82e-01 | 100.0% | 90.6% |
| 4682066 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 61.0 | 5.49e-01 | 97.1% | 72.0% |
| 4676751 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.69 | 61.0 | 5.23e-01 | 98.6% | 62.7% |
| 4595815 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.69 | 50.0 | 5.15e-01 | 100.0% | 81.5% |
| 3722560 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.69 | 62.0 | 4.89e-01 | 100.0% | 65.9% |
| 3403111 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 59.0 | 5.79e-01 | 100.0% | 90.7% |
| 3214896 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 60.0 | 5.08e-01 | 100.0% | 60.9% |
| 3914307 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 59.0 | 5.21e-01 | 100.0% | 95.2% |
| 3891105 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 59.0 | 5.16e-01 | 100.0% | 100.0% |
| 4012729 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 60.0 | 4.88e-01 | 100.0% | 66.9% |
| 3315828 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.67 | 59.0 | 5.64e-01 | 98.6% | 87.5% |
| 4964990 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 60.0 | 5.51e-01 | 100.0% | 78.9% |
| 3424196 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.67 | 60.0 | 5.62e-01 | 100.0% | 84.7% |
| 5013366 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 59.0 | 4.93e-01 | 100.0% | 59.2% |
| 4610349 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.66 | 59.0 | 5.62e-01 | 100.0% | 92.5% |
| 3071227 | 2.1.1.55 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CusF_Ec | 0.66 | 58.0 | 5.19e-01 | 100.0% | 71.0% |
| 3930537 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 58.0 | 5.44e-01 | 98.6% | 81.2% |
| 3861944 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.66 | 59.0 | 5.77e-01 | 98.6% | 93.3% |
| None | — | 0.66 | 60.0 | 3.75e-01 | 100.0% | 20.9% | |
| 4960276 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 58.0 | 5.36e-01 | 100.0% | 77.8% |
| 4945259 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 58.0 | 5.26e-01 | 100.0% | 74.7% |
| 3457922 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 56.0 | 4.36e-01 | 98.6% | 45.6% |
| 3280618 | 2.1.1.132 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5666 | 0.65 | 58.0 | 5.83e-01 | 98.6% | 97.1% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.65 | 58.0 | 5.15e-01 | 100.0% | 73.0% |
| 3888709 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.65 | 58.0 | 4.65e-01 | 100.0% | 60.7% |
| 5064412 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 59.0 | 5.73e-01 | 100.0% | 94.7% |
| 5081145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 58.0 | 5.33e-01 | 100.0% | 80.0% |
| 3616998 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 54.0 | 4.99e-01 | 100.0% | 76.8% |
| 3517296 | 2.1.1.82 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 | 0.64 | 57.0 | 4.55e-01 | 100.0% | 83.0% |
| 3192398 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 38.0 | 2.24e-01 | 73.9% | 8.0% |
| 3591064 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 46.0 | 4.73e-01 | 100.0% | 83.1% |
| 3989890 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.62 | 46.0 | 4.70e-01 | 100.0% | 83.1% |
| 3197689 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.61 | 54.0 | 4.20e-01 | 100.0% | 59.4% |
| 3630124 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 53.0 | 4.65e-01 | 100.0% | 66.7% |
| 4371403 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.59 | 53.0 | 4.56e-01 | 100.0% | 96.4% |
| 4006488 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.58 | 42.0 | 4.34e-01 | 98.6% | 81.5% |
| 4537687 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 41.0 | 4.23e-01 | 100.0% | 81.5% |
| 4675474 | 325.1.7.14 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RPOC_hybrid | 0.57 | 40.0 | 4.21e-01 | 100.0% | 88.3% |
| 4961666 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.55 | 48.0 | 3.93e-01 | 100.0% | 88.5% |
| 5010824 | 2.4.1.7 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK | 0.54 | 46.0 | 4.01e-01 | 100.0% | 92.0% |
| 3982411 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.53 | 37.0 | 3.83e-01 | 100.0% | 81.5% |
| 3979564 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.53 | 37.0 | 3.83e-01 | 100.0% | 81.5% |
| 3173745 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.50 | 44.0 | 3.16e-01 | 100.0% | 72.6% |
D2
medium
residues 90-143
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gw6F01 | 4.10.1090.10 | Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4 | 0.71 | 58.0 | 4.82e-01 | 90.7% | 69.9% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 52.0 | 3.58e-01 | 100.0% | 92.0% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 39.0 | 3.20e-01 | 72.2% | 94.4% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.45e-01 | 74.1% | 34.6% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.53 | 40.0 | 2.65e-01 | 90.7% | 83.6% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 37.0 | 2.38e-01 | 74.1% | 41.7% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.48e-01 | 85.2% | 41.5% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 39.0 | 2.41e-01 | 85.2% | 34.6% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.50 | 34.0 | 2.23e-01 | 74.1% | 58.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981434 | 79.1.1.15 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Apex | 0.91 | 81.0 | 6.46e-01 | 96.3% | 53.0% |
| 3946712 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.91 | 81.0 | 6.99e-01 | 96.3% | 66.3% |
| 3977312 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.90 | 82.0 | 5.75e-01 | 100.0% | 36.1% |
| 4413978 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.87 | 78.0 | 4.88e-01 | 100.0% | 25.4% |
| 3351850 | 5.1.4.255 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD | 0.62 | 43.0 | 2.66e-01 | 75.9% | 63.0% |
| 4332836 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 2.58e-01 | 79.6% | 40.2% |
| 3706745 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.58 | 39.0 | 2.46e-01 | 72.2% | 40.9% |
| 4027923 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 43.0 | 2.48e-01 | 83.3% | 31.5% |
| 3470979 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.58 | 40.0 | 2.58e-01 | 77.8% | 37.8% |
| 2485200 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 41.0 | 2.73e-01 | 77.8% | 72.7% |
| 3260335 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.56 | 39.0 | 2.45e-01 | 77.8% | 35.9% |
| 3314585 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 39.0 | 2.61e-01 | 75.9% | 43.5% |
| 3454721 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.54 | 37.0 | 2.39e-01 | 75.9% | 43.5% |
| 3424086 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.53 | 36.0 | 2.58e-01 | 70.4% | 63.4% |
| 3609150 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 37.0 | 2.37e-01 | 77.8% | 44.5% |
| 3614189 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.52 | 37.0 | 2.44e-01 | 77.8% | 50.0% |
| 1746334 | 79.1.1.12 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C | 0.52 | 44.0 | 3.80e-01 | 100.0% | 68.9% |
| 5010861 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 36.0 | 2.30e-01 | 81.5% | 31.2% |
| 3627903 | 5.1.11.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_HPS5 | 0.50 | 38.0 | 2.27e-01 | 85.2% | 26.9% |