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JGI24723J26617_10000007_prodigal-single.1__X__X__00135
Bact-VirJGI24723J26617_10000007_prodigal-single.1__X__X__00135
Identity
- Kingdom:
- phage
Quality
43.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-85
D2
medium
residues 92-168
Domain cluster:
rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D582-664
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xo8A00 | 2.60.40.1820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 4.29e-01 | 100.0% | 64.2% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 49.0 | 4.64e-01 | 100.0% | 75.0% |
| 5e4sA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.79e-01 | 100.0% | 79.8% |
| 3hlkA01 | 2.60.40.2240 | Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain | 0.58 | 51.0 | 4.31e-01 | 100.0% | 76.3% |
| 3rqwA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.58 | 49.0 | 3.82e-01 | 98.7% | 62.1% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 42.0 | 3.56e-01 | 77.9% | 75.4% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.57 | 44.0 | 4.01e-01 | 85.7% | 84.5% |
| 3qs2A00 | 2.60.40.3290 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial protein EcpA | 0.57 | 47.0 | 3.82e-01 | 100.0% | 90.2% |
| 4ae7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 45.0 | 3.46e-01 | 88.3% | 59.7% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 4.14e-01 | 100.0% | 76.1% |
| 2oafB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 38.0 | 3.20e-01 | 77.9% | 91.0% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 44.0 | 3.98e-01 | 100.0% | 86.6% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.34e-01 | 100.0% | 45.3% |
| 8ciwA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.52 | 43.0 | 3.74e-01 | 98.7% | 94.7% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 37.0 | 3.14e-01 | 76.6% | 49.6% |
| 2o5uA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 37.0 | 3.13e-01 | 77.9% | 88.9% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 40.0 | 3.54e-01 | 88.3% | 91.7% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.51 | 34.0 | 2.56e-01 | 70.1% | 66.0% |
| 4ae8D00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 40.0 | 3.27e-01 | 90.9% | 67.9% |
| 3dkzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.46e-01 | 88.3% | 87.2% |
| 2wsuB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.60e-01 | 100.0% | 86.8% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 39.0 | 2.63e-01 | 88.3% | 63.7% |
| 2wstA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.50 | 41.0 | 3.37e-01 | 100.0% | 80.1% |
| 3lbeB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 39.0 | 3.45e-01 | 88.3% | 65.3% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 39.0 | 3.16e-01 | 85.7% | 48.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3385472 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 54.0 | 5.18e-01 | 100.0% | 83.3% |
| 5015214 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 4.49e-01 | 100.0% | 84.3% |
| 3563152 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.62 | 54.0 | 4.91e-01 | 100.0% | 73.3% |
| 4942527 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.79e-01 | 100.0% | 77.0% |
| 3258963 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 4.67e-01 | 100.0% | 87.5% |
| 3355665 | 3863.1.1.1 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Ysc84 | 0.59 | 37.0 | 2.78e-01 | 100.0% | 23.9% |
| 3514856 | 1181.1.1.0 ↗ | 0.59 | 40.0 | 4.03e-01 | 81.8% | 72.0% | |
| 5055679 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 4.70e-01 | 92.2% | 91.4% |
| 4152684 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.59 | 43.0 | 4.30e-01 | 85.7% | 78.2% |
| 3438167 | 3863.1.1.1 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Ysc84 | 0.58 | 37.0 | 2.89e-01 | 100.0% | 27.8% |
| 4614883 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.58 | 44.0 | 4.38e-01 | 90.9% | 80.0% |
| 3213674 | 11.1.1.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bile_Hydr_Trans | 0.58 | 51.0 | 4.42e-01 | 100.0% | 85.8% |
| 3244054 | 11.1.1.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bile_Hydr_Trans | 0.58 | 50.0 | 4.39e-01 | 100.0% | 83.3% |
| 3270060 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.19e-01 | 100.0% | 61.7% |
| 5041035 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.39e-01 | 100.0% | 74.0% |
| 4080655 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.57 | 46.0 | 4.34e-01 | 90.9% | 74.7% |
| 4283898 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.56 | 45.0 | 4.26e-01 | 90.9% | 72.6% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.55e-01 | 100.0% | 84.2% |
| 4982344 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.47e-01 | 100.0% | 85.9% |
| 3421408 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 45.0 | 3.84e-01 | 92.2% | 57.8% |
| 4254437 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.55 | 44.0 | 4.29e-01 | 89.6% | 80.0% |
| 3631773 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.55 | 42.0 | 3.33e-01 | 85.7% | 65.1% |
| 4965978 | 11.1.1.1421 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7382 | 0.54 | 45.0 | 4.46e-01 | 100.0% | 89.4% |
| 4347156 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 43.0 | 3.62e-01 | 88.3% | 68.9% |
| 3744357 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.54 | 42.0 | 4.08e-01 | 87.0% | 80.0% |
| 3995220 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 3.62e-01 | 100.0% | 67.5% |
| 4526897 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.52 | 41.0 | 3.19e-01 | 88.3% | 53.5% |
| 5071959 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 4.03e-01 | 100.0% | 87.4% |
| 3164980 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 43.0 | 3.79e-01 | 100.0% | 90.6% |
| 4021085 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.51 | 39.0 | 3.12e-01 | 84.4% | 55.2% |
| 3222982 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.51 | 43.0 | 3.56e-01 | 100.0% | 74.7% |
| 5083767 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.51 | 43.0 | 3.37e-01 | 100.0% | 85.4% |
| 3387846 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.50 | 43.0 | 3.80e-01 | 100.0% | 67.5% |
| 3929940 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.50 | 41.0 | 3.16e-01 | 94.8% | 60.5% |
| 3926427 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.50 | 41.0 | 3.44e-01 | 100.0% | 71.9% |
D3
medium
residues 394-501
D4
medium
residues 791-972