←Back to structures
JGI24723J26617_10000007_prodigal-single.1__X__X__00528
Bact-VirJGI24723J26617_10000007_prodigal-single.1__X__X__00528
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-91
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.91 | 52.0 | 5.98e-01 | 83.5% | 76.7% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.90 | 82.0 | 8.42e-01 | 98.7% | 100.0% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.90 | 51.0 | 5.82e-01 | 84.8% | 75.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.90 | 51.0 | 6.40e-01 | 82.3% | 91.8% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 51.0 | 5.56e-01 | 86.1% | 71.2% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 55.0 | 5.42e-01 | 81.0% | 62.7% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 59.0 | 6.43e-01 | 84.8% | 87.7% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 60.0 | 6.46e-01 | 91.1% | 88.2% |
| 2vc8A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 58.0 | 6.08e-01 | 84.8% | 80.6% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 55.0 | 5.82e-01 | 86.1% | 77.5% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 56.0 | 6.00e-01 | 87.3% | 83.8% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 51.0 | 5.58e-01 | 84.8% | 78.8% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 56.0 | 6.06e-01 | 91.1% | 89.4% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 53.0 | 5.63e-01 | 83.5% | 78.9% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 57.0 | 5.16e-01 | 84.8% | 58.1% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 56.0 | 5.81e-01 | 86.1% | 82.2% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 55.0 | 6.20e-01 | 83.5% | 98.3% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 5.87e-01 | 88.6% | 84.0% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 54.0 | 5.69e-01 | 84.8% | 83.1% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 55.0 | 5.45e-01 | 86.1% | 73.2% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 55.0 | 5.70e-01 | 92.4% | 83.8% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 63.0 | 5.27e-01 | 93.7% | 56.2% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 57.0 | 5.78e-01 | 87.3% | 84.4% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 4.88e-01 | 86.1% | 60.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 56.0 | 5.65e-01 | 84.8% | 82.1% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 42.0 | 4.53e-01 | 84.8% | 66.7% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.70 | 40.0 | 4.94e-01 | 83.5% | 93.8% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.70 | 42.0 | 4.99e-01 | 83.5% | 90.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 45.0 | 4.67e-01 | 92.4% | 71.2% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 41.0 | 4.67e-01 | 83.5% | 83.9% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 5.13e-01 | 91.1% | 96.7% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 55.0 | 5.48e-01 | 100.0% | 90.1% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.64 | 49.0 | 4.43e-01 | 94.9% | 59.6% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 44.0 | 4.90e-01 | 92.4% | 98.3% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.97e-01 | 84.8% | 86.3% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.72e-01 | 100.0% | 89.7% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.28e-01 | 84.8% | 71.4% |
| 1wdiA02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.60 | 33.0 | 3.42e-01 | 84.8% | 56.2% |
| 1iz0A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.56 | 35.0 | 2.90e-01 | 96.2% | 35.0% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.82e-01 | 87.3% | 68.1% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 47.0 | 4.00e-01 | 100.0% | 62.1% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 42.0 | 3.56e-01 | 87.3% | 91.7% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.51 | 38.0 | 3.73e-01 | 79.7% | 97.7% |
| 4hfsA00 | 2.60.120.1270 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.08e-01 | 88.6% | 59.6% |
| 3h7oA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 42.0 | 3.82e-01 | 94.9% | 97.3% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 38.0 | 3.25e-01 | 82.3% | 98.5% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4656461 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.90 | 52.0 | 5.94e-01 | 83.5% | 76.7% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.87 | 56.0 | 6.16e-01 | 92.4% | 80.0% |
| 3602785 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 59.0 | 6.70e-01 | 91.1% | 91.7% |
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.86 | 78.0 | 7.85e-01 | 100.0% | 97.5% |
| 3172870 | 4.1.1.67 ↗ | beta barrels › SH3 › SH3 › SH3 › FDF | 0.84 | 57.0 | 5.31e-01 | 86.1% | 57.9% |
| 3473732 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 57.0 | 6.28e-01 | 91.1% | 86.2% |
| 4499953 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.84 | 50.0 | 5.70e-01 | 91.1% | 80.0% |
| 3783301 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 58.0 | 5.18e-01 | 91.1% | 54.3% |
| 5004476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 51.0 | 5.63e-01 | 87.3% | 76.9% |
| 3602921 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 52.0 | 6.15e-01 | 91.1% | 92.7% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.82 | 55.0 | 5.85e-01 | 84.8% | 78.6% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.81 | 52.0 | 5.87e-01 | 84.8% | 83.9% |
| 3690549 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 59.0 | 6.30e-01 | 96.2% | 87.1% |
| 3167351 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.79 | 57.0 | 5.52e-01 | 87.3% | 68.2% |
| 4400642 | 4.1.1.257 ↗ | beta barrels › SH3 › SH3 › SH3 › Flag1_repress | 0.78 | 50.0 | 4.93e-01 | 84.8% | 61.2% |
| 2167708 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 55.0 | 5.96e-01 | 96.2% | 87.7% |
| 5044296 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 61.0 | 6.23e-01 | 91.1% | 84.6% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.77 | 57.0 | 5.49e-01 | 84.8% | 68.5% |
| 5038431 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 5.67e-01 | 83.5% | 81.4% |
| 4876565 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.76 | 54.0 | 5.19e-01 | 84.8% | 65.6% |
| 5081091 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 61.0 | 5.72e-01 | 87.3% | 87.4% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 58.0 | 5.79e-01 | 100.0% | 80.0% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 54.0 | 5.00e-01 | 86.1% | 61.0% |
| 5069300 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 60.0 | 5.43e-01 | 87.3% | 87.6% |
| 3703836 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 64.0 | 5.58e-01 | 94.9% | 84.3% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 63.0 | 5.71e-01 | 93.7% | 71.4% |
| 4010995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 59.0 | 6.12e-01 | 91.1% | 92.0% |
| 3626383 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.72 | 59.0 | 5.51e-01 | 86.1% | 73.7% |
| 5060199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 60.0 | 5.39e-01 | 88.6% | 87.6% |
| 4340758 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 52.0 | 5.58e-01 | 83.5% | 85.7% |
| 3703320 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 58.0 | 5.83e-01 | 87.3% | 86.1% |
| 3785079 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 61.0 | 4.96e-01 | 93.7% | 53.1% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 46.0 | 5.03e-01 | 92.4% | 83.1% |
| 4073433 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 53.0 | 5.31e-01 | 92.4% | 81.2% |
| 4024727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 55.0 | 5.02e-01 | 87.3% | 66.3% |
| 3208152 | 4.1.1.69 ↗ | beta barrels › SH3 › SH3 › SH3 › Clr2 | 0.68 | 54.0 | 3.90e-01 | 87.3% | 55.1% |
| 5003274 | 4.1.1.222 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6948 | 0.67 | 59.0 | 5.68e-01 | 97.5% | 95.6% |
| 3555586 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 54.0 | 5.04e-01 | 87.3% | 77.9% |
| 3965254 | 4.1.1.222 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6948 | 0.65 | 57.0 | 5.42e-01 | 97.5% | 90.5% |
| 3948209 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 51.0 | 5.23e-01 | 100.0% | 89.3% |
| 3690043 | 4.1.1.69 ↗ | beta barrels › SH3 › SH3 › SH3 › Clr2 | 0.65 | 52.0 | 3.68e-01 | 89.9% | 47.3% |
| 552 | 4.1.1.61 ↗ | beta barrels › SH3 › SH3 › SH3 › KapB | 0.64 | 49.0 | 4.43e-01 | 94.9% | 59.6% |
| 3220929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.47e-01 | 86.1% | 74.7% |
| 4555816 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 5.07e-01 | 97.5% | 84.7% |
| 3613187 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.62 | 40.0 | 2.82e-01 | 78.5% | 19.8% |
| 4220126 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 49.0 | 4.88e-01 | 97.5% | 82.4% |
| 5070306 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 53.0 | 4.89e-01 | 97.5% | 86.0% |
| 2137682 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.59 | 44.0 | 4.04e-01 | 79.7% | 89.2% |
| 3965860 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.58 | 42.0 | 3.92e-01 | 75.9% | 60.0% |
| 4182769 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.58 | 35.0 | 3.85e-01 | 98.7% | 76.7% |
| 3960372 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 35.0 | 3.44e-01 | 86.1% | 55.3% |
| 4246480 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 41.0 | 3.90e-01 | 75.9% | 75.8% |
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 41.0 | 3.85e-01 | 74.7% | 74.7% |
| 3947980 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 41.0 | 3.81e-01 | 75.9% | 72.0% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 49.0 | 4.77e-01 | 96.2% | 87.1% |
| 4033182 | 4.1.1.61 ↗ | beta barrels › SH3 › SH3 › SH3 › KapB | 0.57 | 49.0 | 4.31e-01 | 97.5% | 68.3% |
| 3196012 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.17e-01 | 82.3% | 81.9% |
| 4606231 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 40.0 | 3.82e-01 | 77.2% | 78.5% |
| 3738626 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 47.0 | 3.92e-01 | 100.0% | 58.6% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 45.0 | 3.81e-01 | 100.0% | 54.3% |
| 4793345 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.53 | 41.0 | 3.74e-01 | 83.5% | 89.7% |
| 4883261 | 4.1.1.76 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhO | 0.53 | 43.0 | 4.12e-01 | 89.9% | 83.2% |
| 4970693 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.52 | 44.0 | 4.12e-01 | 100.0% | 77.0% |
| 2491495 | 7035.1.1.2 ↗ | beta barrels › Cuben fold of PcncAAAD › Cuben fold of PcncAAAD › Cuben fold of PcncAAAD › PF31270 | 0.51 | 39.0 | 3.20e-01 | 83.5% | 63.2% |
| 3795384 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 44.0 | 3.29e-01 | 100.0% | 37.2% |