←Back to structures
JGI24723J26617_10000007_prodigal-single.1__X__X__00533
Bact-VirJGI24723J26617_10000007_prodigal-single.1__X__X__00533
Identity
- Kingdom:
- phage
Quality
49.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-56
D2
high
residues 174-258
D3
high
residues 478-578
D4
medium
residues 262-363_407-420
Domain cluster:
rep: KJ019128.1__AIX38078.1__Syn7803US88_77__00077__D502-594
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 44.0 | 4.94e-01 | 75.9% | 89.4% |
| 1sixA00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.65 | 46.0 | 4.22e-01 | 73.3% | 76.5% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 45.0 | 4.88e-01 | 72.4% | 90.2% |
| 4b97A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.64 | 46.0 | 4.27e-01 | 75.9% | 96.7% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 45.0 | 4.68e-01 | 75.0% | 93.6% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 45.0 | 4.56e-01 | 75.0% | 90.6% |
| 5gxxA02 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.63 | 46.0 | 4.16e-01 | 75.9% | 98.1% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.62 | 43.0 | 4.42e-01 | 71.6% | 96.4% |
| 4adiB04 | 2.60.40.2650 | Mainly Beta › Sandwich › Immunoglobulin-like › Rubella membrane glycoprotein E1, domain 3 | 0.62 | 37.0 | 4.16e-01 | 73.3% | 78.2% |
| 2rttA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 43.0 | 4.52e-01 | 72.4% | 95.2% |
| 5w1dA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.61 | 44.0 | 4.67e-01 | 75.9% | 88.5% |
| 2wmpB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.61 | 43.0 | 4.26e-01 | 73.3% | 100.0% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 42.0 | 3.95e-01 | 72.4% | 100.0% |
| 1tyjA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 42.0 | 3.76e-01 | 75.0% | 92.9% |
| 5tflB02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.59 | 42.0 | 4.32e-01 | 75.0% | 85.7% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 4.24e-01 | 70.7% | 86.7% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.58 | 40.0 | 3.91e-01 | 71.6% | 70.0% |
| 5wjmA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.58 | 42.0 | 4.30e-01 | 75.9% | 86.4% |
| 8egxA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 40.0 | 4.28e-01 | 71.6% | 92.9% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.33e-01 | 76.7% | 86.4% |
| 5hbaA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 39.0 | 3.80e-01 | 72.4% | 98.5% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 38.0 | 3.58e-01 | 70.7% | 84.0% |
| 8d40A03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 39.0 | 4.12e-01 | 71.6% | 89.9% |
| 7sz8A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.55 | 39.0 | 4.15e-01 | 72.4% | 90.9% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 39.0 | 3.95e-01 | 73.3% | 94.9% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 35.0 | 3.95e-01 | 71.6% | 85.4% |
| 1fmd100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 38.0 | 3.32e-01 | 74.1% | 69.0% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.61e-01 | 75.0% | 96.8% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.51 | 35.0 | 3.77e-01 | 72.4% | 87.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 4.78e-01 | 72.4% | 92.4% |
| 3740389 | 11.1.5.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD | 0.64 | 45.0 | 4.61e-01 | 73.3% | 96.5% |
| 4989055 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 44.0 | 4.22e-01 | 74.1% | 92.8% |
| 4975859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 4.52e-01 | 75.9% | 90.8% |
| 3898330 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 44.0 | 4.55e-01 | 73.3% | 87.6% |
| 3950683 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 44.0 | 4.04e-01 | 73.3% | 98.7% |
| 3671695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 3.88e-01 | 75.0% | 87.2% |
| 4646370 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.61 | 47.0 | 3.93e-01 | 81.9% | 80.0% |
| 5018610 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 4.38e-01 | 75.0% | 91.7% |
| 4008492 | 11.1.5.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Fimbrial | 0.61 | 43.0 | 4.25e-01 | 73.3% | 99.2% |
| 3220964 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.61 | 44.0 | 4.22e-01 | 75.9% | 84.4% |
| 3299765 | 11.1.5.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD | 0.61 | 42.0 | 4.42e-01 | 72.4% | 100.0% |
| 3498711 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.60 | 45.0 | 3.95e-01 | 79.3% | 75.6% |
| 3408645 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.60 | 44.0 | 4.59e-01 | 75.9% | 92.4% |
| 5015803 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 42.0 | 4.39e-01 | 72.4% | 100.0% |
| 3291785 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 42.0 | 4.36e-01 | 72.4% | 100.0% |
| 4095144 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.60 | 44.0 | 4.01e-01 | 78.4% | 90.0% |
| 4083714 | 11.1.5.89 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3707 | 0.60 | 43.0 | 3.85e-01 | 75.0% | 89.7% |
| 3929117 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.59 | 42.0 | 4.29e-01 | 72.4% | 99.1% |
| 3211918 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.59 | 43.0 | 3.93e-01 | 76.7% | 88.7% |
| 3859225 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 42.0 | 4.15e-01 | 75.9% | 69.6% |
| 3915523 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.58 | 42.0 | 4.07e-01 | 75.9% | 66.7% |
| 3893966 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.58 | 42.0 | 4.29e-01 | 75.0% | 91.8% |
| 3742620 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.58 | 41.0 | 4.14e-01 | 73.3% | 100.0% |
| 3927764 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.58 | 40.0 | 4.11e-01 | 71.6% | 99.1% |
| 38343 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.57 | 41.0 | 4.55e-01 | 75.0% | 98.9% |
| 3997122 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.57 | 41.0 | 4.23e-01 | 75.9% | 86.4% |
| 1248331 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 32.0 | 3.44e-01 | 70.7% | 65.6% |
| 2841942 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 37.0 | 3.91e-01 | 71.6% | 91.4% |
| 3630634 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.85e-01 | 72.4% | 90.5% |
| 3804197 | 207.1.1.238 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 | 0.52 | 43.0 | 2.87e-01 | 91.4% | 27.1% |