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JM151

Euk-Vir

Macaca_fuscata_rhadinovirus

JM151__YP_238454__Macaca_fuscata_rhadinovirus__272551

Identity

Accession:: YP_238454 ↗
Protein ID:: JM151
Kingdom:: euk

Quality

88.8 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Macaca_fuscata_rhadinovirus

TaxID: 272551

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-86

PDB

Domain cluster: representative

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3cl3A01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.87	81.0	8.11e-01	98.8%	97.6%
2bbrA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.78	69.0	6.80e-01	100.0%	89.9%
4zbwA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.77	70.0	6.68e-01	100.0%	92.7%
1wxpA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.76	61.0	6.08e-01	86.7%	98.8%
2bbrA02	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.73	59.0	5.56e-01	86.7%	79.0%
2n00A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.70	56.0	5.35e-01	86.7%	87.4%
1v66A00	1.10.720.30	Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain	0.65	46.0	5.07e-01	81.9%	95.4%
7fsfA02	3.30.56.80	Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 ›	0.64	46.0	4.92e-01	81.9%	91.3%
4yosA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.64	47.0	3.77e-01	77.1%	53.8%
7dkaA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.56	40.0	3.10e-01	85.5%	31.8%
2ki4B00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.54	30.0	2.92e-01	83.1%	44.8%
2cqnA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.54	31.0	3.18e-01	75.9%	55.8%
6heiA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.54	42.0	2.89e-01	86.7%	52.6%
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.52	34.0	3.38e-01	74.7%	62.5%
3vokA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.50	36.0	2.96e-01	77.1%	69.9%
6k4yI00	1.10.1810.10	Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A	0.50	30.0	3.03e-01	80.7%	56.8%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2851540	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.88	82.0	7.97e-01	100.0%	91.2%
3883722	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.74	68.0	6.47e-01	100.0%	93.7%
3816901	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.67	43.0	5.08e-01	78.3%	100.0%
4490066	4953.1.1.4 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2	0.58	40.0	3.96e-01	85.5%	66.7%
5029888	2485.1.1.0 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like	0.57	45.0	3.38e-01	85.5%	39.0%
4628578	101.1.4.26 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DNA_meth_N	0.56	38.0	4.19e-01	81.9%	90.8%
3236728	106.1.1.0 ↗	alpha arrays › Globin-like › Globin-like › Globin-like	0.54	46.0	3.78e-01	98.8%	70.3%
3607479	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.53	37.0	3.83e-01	86.7%	80.0%
3612970	101.1.2.127 ↗	alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8	0.53	30.0	2.90e-01	74.7%	45.9%
4940660	4040.1.1.1 ↗	alpha bundles › Fic-like › Fic-like › Fic-like › Fic	0.51	44.0	3.30e-01	100.0%	53.2%
3783816	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.51	44.0	4.12e-01	100.0%	81.8%
3970930	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.51	40.0	3.15e-01	86.7%	84.9%

D2 high residues 93-170

PDB

Domain cluster: rep: ORF71__YP_001129429__Human_gammaherpesvirus_8__37296__D93-171

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01335.28 best	DED	50.3	3.20e-13	98.7%	91.5%