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JM70

Euk-Vir

Macaca_fuscata_rhadinovirus

JM70__YP_238373__Macaca_fuscata_rhadinovirus__272551

Identity

Accession:: YP_238373 ↗
Protein ID:: JM70
Kingdom:: euk

Quality

85.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Macaca_fuscata_rhadinovirus

TaxID: 272551

Cluster

View cluster (70 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-212_233-263

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01677.23 best	Herpes_UL7	157.7	3.80e-46	86.2%	98.5%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l6jA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.61	32.0	4.38e-01	81.0%	97.3%
2lseA00	1.20.120.1360	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.61	26.0	3.70e-01	71.9%	82.2%
1sz9C00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.59	33.0	3.93e-01	71.9%	80.0%
2qgmA03	1.20.1440.30	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain	0.54	28.0	3.57e-01	74.8%	85.3%
3sl9B00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.53	33.0	3.72e-01	72.4%	78.2%
2mx8A01	1.10.274.70	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain	0.52	25.0	3.32e-01	80.0%	82.3%
4u2xF00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.51	34.0	3.76e-01	73.3%	81.1%
6wm2P01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.51	36.0	3.13e-01	71.4%	58.5%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3597418	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	38.0	3.82e-01	77.1%	70.2%
3613652	109.4.1.161 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › mTOR_dom	0.53	35.0	2.56e-01	73.8%	26.1%
3631631	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	40.0	3.48e-01	79.0%	76.2%
4012051	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	36.0	3.38e-01	72.4%	74.3%
3999280	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	38.0	3.88e-01	75.2%	82.5%
3750363	109.4.1.947 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_DAAF5	0.51	37.0	3.44e-01	74.3%	69.4%
3181695	109.4.1.583 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi	0.51	37.0	3.40e-01	73.3%	93.3%
3511803	109.4.1.1638 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N, XMAP215_CLASP_TOG	0.50	38.0	2.75e-01	76.7%	46.8%
3610694	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	44.0	3.76e-01	92.4%	86.7%
3222674	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	37.0	3.93e-01	77.6%	85.4%
3928537	109.4.1.33 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT	0.50	36.0	4.01e-01	77.1%	91.8%
3414688	109.4.1.170 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N	0.50	40.0	2.56e-01	83.3%	28.5%