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JN116823.1__AEV51933.1__X__00079
Bact-VirJN116823.1__AEV51933.1__X__00079
Identity
- Accession:
- JN116823 ↗
- Kingdom:
- phage
Quality
72.1
mean pLDDT
Taxonomy
TaxID: 1109713
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-80
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.65 | 46.0 | 4.93e-01 | 86.4% | 89.1% |
| 2iu8C02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.55 | 41.0 | 3.03e-01 | 84.8% | 59.2% |
| 1rsgA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 37.0 | 2.60e-01 | 77.3% | 94.7% |
| 2kaeA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.52 | 31.0 | 3.33e-01 | 74.2% | 69.6% |
| 3dcpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 44.0 | 2.98e-01 | 100.0% | 63.0% |
| 2dsmA00 | 3.30.40.30 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › YqaI domain | 0.51 | 34.0 | 3.40e-01 | 100.0% | 65.3% |
| 2uvfB02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.51 | 38.0 | 2.45e-01 | 89.4% | 82.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594415 | 4015.1.1.0 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins | 0.54 | 45.0 | 3.27e-01 | 97.0% | 53.3% |
| 3949298 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.54 | 47.0 | 3.49e-01 | 100.0% | 64.6% |
| 3478778 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 45.0 | 2.92e-01 | 100.0% | 92.1% |
D2
high
residues 90-181
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 21.8 | 3.10e-04 | 90.2% | 87.8% |
| PF13455.13 | MUG113 | 27.4 | 5.50e-06 | 73.9% | 83.6% |