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JN116824.1__AEV51982.1__X__00046
Bact-VirJN116824.1__AEV51982.1__X__00046
Identity
- Accession:
- JN116824 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
TaxID: 1109714
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-147
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
D2
high
residues 159-244
Domain cluster:
rep: MW073100.1__QWT28899.1__vBMoxSR1_gp49__00049__D318-402
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 39.0 | 3.52e-01 | 100.0% | 44.3% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 45.0 | 3.93e-01 | 100.0% | 51.5% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 4.82e-01 | 100.0% | 97.1% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 45.0 | 4.15e-01 | 100.0% | 62.2% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 39.0 | 3.10e-01 | 100.0% | 31.7% |
| 1s48A04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 46.0 | 4.20e-01 | 100.0% | 64.9% |
| 5edxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.70e-01 | 100.0% | 79.8% |
| 5jxsA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 52.0 | 4.42e-01 | 100.0% | 63.4% |
| 6qwtA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 52.0 | 4.43e-01 | 100.0% | 63.1% |
| 1ra6A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 51.0 | 4.81e-01 | 100.0% | 84.9% |
| 2atpD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.66e-01 | 100.0% | 82.1% |
| 3h5xA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 51.0 | 4.65e-01 | 100.0% | 76.7% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.57 | 35.0 | 2.17e-01 | 83.7% | 10.2% |
| 2cpcA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.27e-01 | 100.0% | 81.6% |
| 5uv6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.20e-01 | 100.0% | 79.8% |
| 2r15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.95e-01 | 100.0% | 64.9% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 48.0 | 3.60e-01 | 100.0% | 67.1% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 45.0 | 4.03e-01 | 100.0% | 62.4% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 45.0 | 4.40e-01 | 100.0% | 84.0% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.54 | 39.0 | 3.83e-01 | 100.0% | 68.4% |
| 4hkqA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 46.0 | 3.89e-01 | 100.0% | 57.6% |
| 2jllA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.24e-01 | 100.0% | 84.2% |
| 7jooC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.40e-01 | 100.0% | 92.8% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 3.84e-01 | 100.0% | 63.4% |
| 7qryB01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.51 | 44.0 | 3.73e-01 | 100.0% | 75.8% |
| 3afoB02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.51 | 45.0 | 3.89e-01 | 100.0% | 97.1% |
| 4haoA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.51 | 45.0 | 3.93e-01 | 100.0% | 97.7% |
| 1u0tA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.51 | 44.0 | 3.86e-01 | 100.0% | 97.8% |
| 4pbpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.39e-01 | 100.0% | 60.7% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.50e-01 | 100.0% | 81.7% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 40.0 | 3.56e-01 | 95.3% | 59.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3759364 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.82 | 76.0 | 7.05e-01 | 100.0% | 98.1% |
| 3759359 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.81 | 75.0 | 6.85e-01 | 100.0% | 90.0% |
| 4379152 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.66 | 51.0 | 5.31e-01 | 100.0% | 87.5% |
| 3240188 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 45.0 | 4.17e-01 | 100.0% | 59.1% |
| 3999209 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 45.0 | 4.09e-01 | 100.0% | 55.8% |
| 139710 | 10.32.1.27 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 | 0.61 | 45.0 | 3.93e-01 | 100.0% | 51.5% |
| 3920444 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.60 | 52.0 | 4.21e-01 | 100.0% | 51.1% |
| 5367 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.60 | 53.0 | 3.48e-01 | 100.0% | 38.1% |
| 1173784 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.59 | 52.0 | 3.45e-01 | 100.0% | 37.9% |
| None | — | 0.59 | 52.0 | 3.45e-01 | 100.0% | 37.4% | |
| 4004345 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.58 | 41.0 | 4.42e-01 | 98.8% | 91.4% |
| 3902170 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.58 | 46.0 | 4.06e-01 | 100.0% | 59.2% |
| 3946603 | 10.32.1.27 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 | 0.57 | 48.0 | 4.06e-01 | 100.0% | 55.2% |
| 3897045 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.57 | 43.0 | 4.09e-01 | 100.0% | 66.7% |
| 4541921 | 10.32.1.71 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › AGA-YXIM_GBD | 0.56 | 41.0 | 3.54e-01 | 100.0% | 47.6% |
| 3509392 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 47.0 | 3.98e-01 | 100.0% | 72.5% |
| 5077501 | 3715.1.1.0 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e | 0.55 | 46.0 | 4.64e-01 | 100.0% | 94.1% |
| 5009955 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 44.0 | 4.07e-01 | 100.0% | 69.1% |
| 4928347 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.54 | 48.0 | 3.80e-01 | 100.0% | 54.5% |
| 3704302 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 39.0 | 3.42e-01 | 79.1% | 96.3% |
| 4432927 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.53 | 47.0 | 3.86e-01 | 100.0% | 83.1% |
| 5038687 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 43.0 | 4.12e-01 | 100.0% | 77.0% |
| 1186663 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 47.0 | 3.42e-01 | 100.0% | 49.8% |
| 4869676 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 46.0 | 3.50e-01 | 100.0% | 55.1% |
| 4201960 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.52 | 46.0 | 3.78e-01 | 100.0% | 79.4% |
| 4119524 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.52 | 46.0 | 3.74e-01 | 100.0% | 81.8% |
| 4525237 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.52 | 46.0 | 3.77e-01 | 100.0% | 81.2% |
| 4213619 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.52 | 45.0 | 3.72e-01 | 100.0% | 79.3% |
| 3410708 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 41.0 | 3.35e-01 | 87.2% | 98.2% |
| 4358753 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.51 | 45.0 | 3.64e-01 | 100.0% | 77.6% |
| 4568883 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.51 | 44.0 | 3.61e-01 | 100.0% | 77.5% |
| 5037835 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 42.0 | 3.71e-01 | 100.0% | 62.4% |
| 3411013 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.50 | 41.0 | 3.49e-01 | 91.9% | 58.0% |
| 4796734 | 10.32.1.90 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CatAgl_D1 | 0.50 | 44.0 | 3.63e-01 | 100.0% | 63.4% |
| 4941553 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.50 | 44.0 | 3.74e-01 | 100.0% | 87.6% |