←Back to structures
JN116825.1__AEV52004.1__X__00008
Bact-VirJN116825.1__AEV52004.1__X__00008
Identity
- Accession:
- JN116825 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 60-120
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 46.0 | 4.73e-01 | 88.5% | 60.3% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 55.0 | 5.17e-01 | 100.0% | 68.1% |
| 7q37A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.70 | 51.0 | 3.45e-01 | 77.0% | 50.5% |
| 3a1sA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 63.0 | 5.55e-01 | 100.0% | 89.8% |
| 1b7eA02 | 1.10.740.10 | Mainly Alpha › Orthogonal Bundle › Transferase Inhibitor Protein From Tn5; Chain A, domain2 › Transferase Inhibitor Protein From Tn5; Chain | 0.70 | 53.0 | 4.17e-01 | 82.0% | 86.5% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.69 | 45.0 | 4.14e-01 | 86.9% | 52.6% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.68 | 44.0 | 4.28e-01 | 90.2% | 58.6% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 53.0 | 4.29e-01 | 96.7% | 44.7% |
| 1z6oM00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 55.0 | 3.75e-01 | 88.5% | 51.3% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 51.0 | 4.12e-01 | 96.7% | 45.5% |
| 2cfqA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.65 | 44.0 | 3.04e-01 | 83.6% | 20.5% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 46.0 | 4.59e-01 | 85.2% | 75.8% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 47.0 | 2.84e-01 | 83.6% | 11.2% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.63 | 58.0 | 4.16e-01 | 100.0% | 87.1% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.62 | 53.0 | 4.21e-01 | 95.1% | 46.4% |
| 3bbzA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.62 | 31.0 | 3.43e-01 | 72.1% | 56.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 55.0 | 5.18e-01 | 100.0% | 82.2% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.61 | 55.0 | 5.23e-01 | 100.0% | 84.5% |
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.61 | 31.0 | 3.26e-01 | 72.1% | 49.1% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.61 | 47.0 | 4.01e-01 | 88.5% | 52.1% |
| 3qx3A04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.61 | 50.0 | 4.23e-01 | 90.2% | 94.0% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.60 | 52.0 | 4.15e-01 | 95.1% | 82.4% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 51.0 | 4.57e-01 | 100.0% | 68.3% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 39.0 | 3.93e-01 | 80.3% | 67.2% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 54.0 | 5.02e-01 | 100.0% | 94.6% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.59 | 53.0 | 4.86e-01 | 100.0% | 78.8% |
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 47.0 | 4.46e-01 | 96.7% | 74.0% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.58 | 48.0 | 3.41e-01 | 91.8% | 93.2% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 48.0 | 4.08e-01 | 90.2% | 88.8% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 53.0 | 4.87e-01 | 100.0% | 80.8% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.57 | 48.0 | 3.55e-01 | 95.1% | 83.8% |
| 7ce1A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 39.0 | 4.15e-01 | 83.6% | 82.7% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 51.0 | 3.94e-01 | 100.0% | 53.7% |
| 3s3lA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 48.0 | 3.56e-01 | 95.1% | 40.3% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.56 | 49.0 | 4.46e-01 | 100.0% | 75.3% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 48.0 | 2.96e-01 | 98.4% | 39.9% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.55 | 43.0 | 4.00e-01 | 83.6% | 70.7% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 39.0 | 4.30e-01 | 75.4% | 100.0% |
| 1sg6A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.54 | 43.0 | 3.07e-01 | 90.2% | 28.9% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 47.0 | 3.53e-01 | 95.1% | 53.9% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.53 | 38.0 | 3.75e-01 | 73.8% | 74.6% |
| 3ek3A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 40.0 | 2.98e-01 | 85.2% | 60.1% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 41.0 | 2.77e-01 | 91.8% | 22.7% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3248309 | 2485.1.1.17 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › OST3_OST6 | 0.78 | 51.0 | 3.98e-01 | 88.5% | 34.2% |
| 3951222 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.74 | 60.0 | 5.76e-01 | 100.0% | 75.7% |
| 3227781 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.71 | 51.0 | 4.21e-01 | 100.0% | 42.7% |
| 3875760 | 11.2.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_CAPS | 0.71 | 56.0 | 3.40e-01 | 85.2% | 20.8% |
| 4346887 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 60.0 | 5.58e-01 | 100.0% | 74.7% |
| 3282873 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.69 | 47.0 | 4.73e-01 | 86.9% | 69.8% |
| 3482601 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.68 | 50.0 | 3.58e-01 | 98.4% | 26.7% |
| 4030194 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.67 | 50.0 | 3.06e-01 | 83.6% | 13.2% |
| 3362557 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.66 | 58.0 | 3.93e-01 | 95.1% | 27.6% |
| 2526759 | 2003.1.2.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.66 | 50.0 | 3.70e-01 | 83.6% | 30.7% |
| 3581552 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.66 | 56.0 | 3.53e-01 | 98.4% | 92.7% |
| 3782324 | 5054.1.1.61 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › ELO | 0.63 | 51.0 | 3.52e-01 | 96.7% | 42.1% |
| 3731064 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.63 | 53.0 | 4.46e-01 | 100.0% | 54.5% |
| 4520394 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.62 | 49.0 | 4.71e-01 | 91.8% | 73.9% |
| 4416001 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.62 | 54.0 | 3.51e-01 | 100.0% | 40.0% |
| 3923557 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 55.0 | 3.82e-01 | 100.0% | 32.0% |
| 3447438 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 44.0 | 3.75e-01 | 80.3% | 76.4% |
| 3507551 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.60 | 55.0 | 4.68e-01 | 100.0% | 66.3% |
| 3612403 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.60 | 53.0 | 4.03e-01 | 100.0% | 59.3% |
| 3971502 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.59 | 47.0 | 4.67e-01 | 85.2% | 81.5% |
| 3648687 | 604.12.1.89 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › CDP-OH_P_transf | 0.59 | 51.0 | 4.37e-01 | 98.4% | 61.1% |
| 4968655 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 52.0 | 3.86e-01 | 98.4% | 96.8% |
| 4342015 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.58 | 47.0 | 2.85e-01 | 100.0% | 32.2% |
| 3593398 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.58 | 49.0 | 4.01e-01 | 98.4% | 50.4% |
| 3578011 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 52.0 | 3.15e-01 | 100.0% | 27.5% |
| 3385052 | 2484.1.1.50 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT | 0.57 | 50.0 | 3.56e-01 | 96.7% | 33.1% |
| 3407735 | 3289.1.1.8 ↗ | alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Strumpellin | 0.57 | 48.0 | 3.99e-01 | 91.8% | 60.0% |
| 3904130 | 1203.1.2.1 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 | 0.57 | 50.0 | 4.04e-01 | 100.0% | 52.5% |
| 4340199 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 46.0 | 3.53e-01 | 90.2% | 49.0% |
| 3277932 | 150.5.1.52 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE | 0.56 | 49.0 | 4.34e-01 | 100.0% | 66.7% |
| 4293828 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.56 | 46.0 | 3.65e-01 | 100.0% | 44.0% |
| 3396665 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.56 | 49.0 | 4.21e-01 | 96.7% | 81.1% |
| 4947878 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 49.0 | 3.51e-01 | 100.0% | 84.4% |
| 4975050 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.55 | 43.0 | 4.05e-01 | 86.9% | 69.3% |
| 2722110 | 5000.3.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2 | 0.53 | 44.0 | 3.23e-01 | 88.5% | 70.4% |
| 3935050 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 45.0 | 3.00e-01 | 100.0% | 50.8% |
D2
medium
residues 1-50_123-138
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 50.0 | 5.73e-01 | 98.5% | 93.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 51.0 | 5.17e-01 | 100.0% | 71.2% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 43.0 | 4.54e-01 | 89.4% | 64.4% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 54.0 | 5.44e-01 | 98.5% | 78.5% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 5.24e-01 | 98.5% | 86.0% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.70 | 46.0 | 4.97e-01 | 100.0% | 78.9% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 47.0 | 5.27e-01 | 100.0% | 92.2% |
| 3f3zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 48.0 | 4.41e-01 | 72.7% | 100.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 46.0 | 5.12e-01 | 100.0% | 90.2% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 44.0 | 4.80e-01 | 98.5% | 81.5% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 41.0 | 4.23e-01 | 90.9% | 65.6% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.88e-01 | 100.0% | 80.6% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 42.0 | 4.26e-01 | 90.9% | 66.2% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 39.0 | 4.01e-01 | 89.4% | 64.1% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.45e-01 | 100.0% | 66.2% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 4.79e-01 | 100.0% | 92.5% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 45.0 | 2.89e-01 | 78.8% | 33.0% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 4.96e-01 | 100.0% | 80.6% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.61 | 43.0 | 4.66e-01 | 100.0% | 96.1% |
| 1l0qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 46.0 | 3.00e-01 | 83.3% | 65.4% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 47.0 | 4.91e-01 | 100.0% | 93.3% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 50.0 | 3.26e-01 | 95.5% | 93.0% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 42.0 | 3.84e-01 | 75.8% | 93.6% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 46.0 | 4.39e-01 | 100.0% | 69.6% |
| 3ffvA00 | 3.40.1580.20 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein | 0.59 | 43.0 | 3.15e-01 | 77.3% | 30.9% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 47.0 | 4.79e-01 | 100.0% | 90.6% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 45.0 | 4.71e-01 | 100.0% | 93.3% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 44.0 | 4.60e-01 | 100.0% | 90.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 44.0 | 4.67e-01 | 100.0% | 94.9% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 44.0 | 4.38e-01 | 97.0% | 82.9% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 43.0 | 4.54e-01 | 100.0% | 94.8% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.56 | 44.0 | 2.75e-01 | 89.4% | 58.1% |
| 3c7xA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.56 | 43.0 | 3.14e-01 | 84.8% | 42.3% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 45.0 | 3.12e-01 | 95.5% | 96.6% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 4.54e-01 | 98.5% | 98.2% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.55 | 43.0 | 2.78e-01 | 89.4% | 24.6% |
| 2e5kA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 44.0 | 4.51e-01 | 100.0% | 92.2% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.86e-01 | 93.9% | 62.9% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 43.0 | 4.34e-01 | 98.5% | 86.6% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.49e-01 | 81.8% | 83.3% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.94e-01 | 100.0% | 86.1% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 43.0 | 3.78e-01 | 90.9% | 85.9% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.53 | 42.0 | 3.41e-01 | 97.0% | 75.2% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 35.0 | 2.86e-01 | 100.0% | 38.0% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 43.0 | 3.37e-01 | 93.9% | 45.1% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 43.0 | 4.14e-01 | 100.0% | 80.5% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 37.0 | 2.93e-01 | 81.8% | 87.0% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.62e-01 | 100.0% | 88.4% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 33.0 | 3.36e-01 | 92.4% | 67.2% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 39.0 | 3.77e-01 | 87.9% | 78.5% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 51.0 | 4.67e-01 | 98.5% | 50.6% |
| 3707634 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 53.0 | 5.73e-01 | 98.5% | 81.8% |
| 3866038 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.79 | 51.0 | 4.65e-01 | 100.0% | 51.8% |
| 3579591 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.78 | 52.0 | 5.70e-01 | 98.5% | 83.6% |
| 3922679 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.77 | 49.0 | 5.57e-01 | 98.5% | 86.0% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.77 | 50.0 | 5.47e-01 | 98.5% | 80.0% |
| 3840677 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 51.0 | 4.38e-01 | 98.5% | 46.0% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 48.0 | 5.03e-01 | 98.5% | 71.7% |
| 3820065 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 49.0 | 5.32e-01 | 98.5% | 81.8% |
| 4002679 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.74 | 49.0 | 3.97e-01 | 98.5% | 37.5% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.73 | 51.0 | 3.75e-01 | 100.0% | 29.1% |
| 3274582 | 4.1.1.365 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C | 0.73 | 48.0 | 5.24e-01 | 98.5% | 81.8% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 49.0 | 4.59e-01 | 98.5% | 58.7% |
| 3584364 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 5.21e-01 | 98.5% | 88.0% |
| 547 | 4.1.1.49 ↗ | beta barrels › SH3 › SH3 › SH3 › KorB_C | 0.70 | 46.0 | 5.02e-01 | 100.0% | 83.3% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.67 | 48.0 | 4.70e-01 | 98.5% | 70.0% |
| 3712451 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 4.00e-01 | 98.5% | 42.4% |
| 4941620 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 46.0 | 4.86e-01 | 100.0% | 81.7% |
| 4644007 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 46.0 | 4.85e-01 | 100.0% | 83.1% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.63 | 48.0 | 4.71e-01 | 98.5% | 75.7% |
| 4372288 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.62 | 48.0 | 5.05e-01 | 98.5% | 91.7% |
| 3644180 | 5.1.5.98 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like | 0.62 | 47.0 | 3.01e-01 | 83.3% | 27.8% |
| 3443636 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 52.0 | 3.32e-01 | 95.5% | 94.5% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 3.94e-01 | 100.0% | 58.7% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.61 | 44.0 | 4.13e-01 | 100.0% | 62.5% |
| 3469800 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 43.0 | 4.10e-01 | 75.8% | 86.3% |
| 3620934 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 47.0 | 4.47e-01 | 100.0% | 70.0% |
| 3482646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 3.30e-01 | 83.3% | 37.0% |
| 5077007 | 2004.1.1.129 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zot | 0.60 | 40.0 | 2.89e-01 | 71.2% | 99.5% |
| 3549474 | 4.1.1.406 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-A_UBE2O | 0.59 | 54.0 | 3.95e-01 | 100.0% | 89.9% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.59 | 51.0 | 4.93e-01 | 100.0% | 84.0% |
| 3479037 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.08e-01 | 80.3% | 91.3% |
| 3324058 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 44.0 | 2.76e-01 | 83.3% | 22.9% |
| 3448857 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 48.0 | 3.07e-01 | 95.5% | 94.6% |
| 3789072 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 47.0 | 2.96e-01 | 92.4% | 93.9% |
| 3744093 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 44.0 | 2.75e-01 | 86.4% | 32.8% |
| 3481726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.81e-01 | 100.0% | 96.7% |
| 3300916 | 5.1.4.231 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_3 | 0.57 | 43.0 | 2.85e-01 | 83.3% | 23.0% |
| 4929601 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 48.0 | 3.09e-01 | 98.5% | 92.2% |
| 3450584 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 48.0 | 3.10e-01 | 95.5% | 90.8% |
| 3484618 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.57 | 45.0 | 4.38e-01 | 100.0% | 77.3% |
| 3383121 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.57 | 47.0 | 3.09e-01 | 95.5% | 93.3% |
| 3234947 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 46.0 | 4.67e-01 | 93.9% | 92.3% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.56 | 51.0 | 4.29e-01 | 100.0% | 87.2% |
| 3568983 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 45.0 | 2.80e-01 | 93.9% | 89.4% |
| 3421020 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 42.0 | 2.97e-01 | 83.3% | 56.8% |
| 3651961 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.56 | 37.0 | 3.97e-01 | 100.0% | 83.6% |
| 4012002 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.52e-01 | 100.0% | 85.7% |
| 3245798 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 48.0 | 2.56e-01 | 95.5% | 76.3% |
| 3879172 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 44.0 | 4.50e-01 | 100.0% | 90.8% |
| 3597793 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.54 | 32.0 | 2.59e-01 | 74.2% | 28.9% |
| 3578855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 40.0 | 3.82e-01 | 100.0% | 67.5% |
| 3648232 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 44.0 | 2.86e-01 | 95.5% | 95.3% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.53 | 48.0 | 3.88e-01 | 100.0% | 74.4% |
| 4930465 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.53 | 39.0 | 4.02e-01 | 77.3% | 98.3% |
| 3898170 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.53 | 44.0 | 4.23e-01 | 90.9% | 86.7% |
| 3710572 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 39.0 | 2.53e-01 | 83.3% | 36.5% |
| 3509731 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.50 | 38.0 | 2.68e-01 | 81.8% | 79.5% |