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JN116828.1__AEV52234.1__X__00021
Bact-VirJN116828.1__AEV52234.1__X__00021
Identity
- Accession:
- JN116828 ↗
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-114
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.62 | 48.0 | 3.94e-01 | 84.9% | 58.9% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.60 | 42.0 | 3.78e-01 | 74.0% | 92.5% |
| 1pbwB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.56 | 42.0 | 3.17e-01 | 87.7% | 30.8% |
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.53 | 40.0 | 3.70e-01 | 82.2% | 87.8% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 35.0 | 3.28e-01 | 71.2% | 71.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264670 | 601.7.1.35 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › UFL1_C | 0.73 | 52.0 | 4.51e-01 | 75.3% | 91.2% |
| 3785926 | 101.1.15.3 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C_fung | 0.59 | 48.0 | 4.12e-01 | 94.5% | 56.5% |
| 4106383 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.58 | 53.0 | 4.07e-01 | 100.0% | 68.1% |
| 3480146 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.52 | 39.0 | 3.57e-01 | 87.7% | 71.8% |
| 3742895 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.51 | 44.0 | 3.48e-01 | 100.0% | 66.1% |
| 3734994 | 109.4.1.847 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT1_C_fung | 0.51 | 36.0 | 3.10e-01 | 76.7% | 68.8% |
| 3197359 | 109.4.1.191 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7 | 0.51 | 42.0 | 2.70e-01 | 95.9% | 32.6% |