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JN175269.1__AEO14571.1__MT_57025__00024
Bact-VirJN175269.1__AEO14571.1__MT_57025__00024
Identity
- Accession:
- JN175269 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-55
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 47.0 | 3.43e-01 | 76.2% | 82.5% |
| 1wbaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 51.0 | 3.52e-01 | 92.9% | 49.7% |
| 4fe9A03 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 52.0 | 3.92e-01 | 100.0% | 63.6% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 50.0 | 4.25e-01 | 100.0% | 91.0% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 49.0 | 4.44e-01 | 100.0% | 95.2% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.61 | 38.0 | 2.77e-01 | 100.0% | 21.5% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 3.27e-01 | 76.2% | 44.7% |
| 2b0aA00 | 3.50.30.50 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase | 0.60 | 52.0 | 3.41e-01 | 100.0% | 64.0% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 46.0 | 4.21e-01 | 100.0% | 95.5% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.58 | 43.0 | 4.39e-01 | 100.0% | 82.9% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 50.0 | 3.80e-01 | 100.0% | 85.4% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 4.14e-01 | 100.0% | 92.4% |
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 43.0 | 4.34e-01 | 100.0% | 88.6% |
| 3emiA00 | 3.90.1780.10 | Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin | 0.56 | 39.0 | 3.06e-01 | 78.6% | 32.7% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 3.99e-01 | 100.0% | 92.3% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.55 | 36.0 | 3.14e-01 | 100.0% | 36.4% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 37.0 | 2.56e-01 | 90.5% | 18.5% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 40.0 | 3.32e-01 | 100.0% | 57.8% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 3.15e-01 | 100.0% | 48.1% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.41e-01 | 100.0% | 40.4% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 35.0 | 2.19e-01 | 100.0% | 10.9% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.52 | 41.0 | 3.49e-01 | 90.5% | 63.5% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.02e-01 | 100.0% | 50.4% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.51 | 39.0 | 2.96e-01 | 97.6% | 95.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001130 | 101.1.2.44 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 | 0.72 | 46.0 | 3.45e-01 | 100.0% | 27.0% |
| 4971297 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 47.0 | 3.57e-01 | 76.2% | 42.9% |
| 3598260 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.61 | 40.0 | 2.89e-01 | 100.0% | 21.6% |
| 4483987 | 374.1.1.2 ↗ | few secondary structure elements › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) › BssC_TutF | 0.61 | 45.0 | 4.16e-01 | 100.0% | 61.8% |
| 4958997 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.60 | 42.0 | 3.43e-01 | 76.2% | 48.9% |
| 4996551 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 43.0 | 3.10e-01 | 76.2% | 41.4% |
| 3941629 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.59 | 41.0 | 2.36e-01 | 100.0% | 7.0% |
| 5034882 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.59 | 44.0 | 4.34e-01 | 85.7% | 84.4% |
| 1311761 | 374.1.1.2 ↗ | few secondary structure elements › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) › HIPIP (high potential iron protein) › BssC_TutF | 0.58 | 43.0 | 4.54e-01 | 100.0% | 91.9% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.58 | 46.0 | 3.60e-01 | 100.0% | 83.6% |
| 4676584 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.58 | 49.0 | 4.34e-01 | 100.0% | 84.6% |
| 4166380 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.56 | 44.0 | 4.03e-01 | 100.0% | 93.8% |
| 4989747 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 45.0 | 4.06e-01 | 100.0% | 98.5% |
| 6103 | 221.1.1.15 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Staphylokinase | 0.55 | 39.0 | 2.83e-01 | 78.6% | 80.4% |
| 3233984 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.55 | 37.0 | 2.40e-01 | 71.4% | 35.0% |
| 3784922 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.53 | 38.0 | 3.00e-01 | 83.3% | 65.5% |
| 5032057 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 38.0 | 2.79e-01 | 73.8% | 50.8% |
| 3995204 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.52 | 38.0 | 3.39e-01 | 100.0% | 52.3% |
| 3595817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.24e-01 | 100.0% | 89.1% |
| 3254857 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 36.0 | 3.29e-01 | 78.6% | 81.7% |
| 3276351 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.50 | 37.0 | 2.35e-01 | 90.5% | 76.4% |