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JN175269.1__AEO14610.1__MT_57071__00063
Bact-VirJN175269.1__AEO14610.1__MT_57071__00063
Identity
- Accession:
- JN175269 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-38
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ywwA01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.61 | 48.0 | 3.83e-01 | 100.0% | 48.4% |
| 4qclA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 3.50e-01 | 100.0% | 64.9% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 45.0 | 3.50e-01 | 100.0% | 66.0% |
| 2dnlA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 45.0 | 3.53e-01 | 100.0% | 56.2% |
| 3plwA00 | 3.30.40.190 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.54 | 38.0 | 2.96e-01 | 89.2% | 42.7% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 37.0 | 3.05e-01 | 100.0% | 71.4% |
| 3pfeA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 36.0 | 2.30e-01 | 91.9% | 11.7% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.72e-01 | 100.0% | 91.2% |
| 3n5oA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 36.0 | 2.95e-01 | 81.1% | 36.0% |
| 2cphA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 37.0 | 3.26e-01 | 100.0% | 58.2% |
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 38.0 | 3.47e-01 | 100.0% | 93.5% |
| 3tqvA01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.51 | 38.0 | 2.81e-01 | 100.0% | 36.1% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 2.68e-01 | 100.0% | 69.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024019 | 327.16.1.18 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Se_S_carrier | 0.68 | 55.0 | 4.50e-01 | 100.0% | 53.8% |
| 4983074 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.52 | 41.0 | 2.92e-01 | 94.6% | 50.8% |
| 4023925 | 4250.1.1.1 ↗ | alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding | 0.50 | 35.0 | 2.32e-01 | 81.1% | 46.7% |