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JN371768.1__AFD02747.1__X__00131
Bact-VirJN371768.1__AFD02747.1__X__00131
Identity
- Accession:
- JN371768 ↗
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Namakavirus›
Synechococcus_phage_S-MbCM6
TaxID: 3126011
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-88
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00586.30 best | AIRS | 36.0 | 1.10e-08 | 96.5% | 37.2% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cliB01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.80 | 65.0 | 4.77e-01 | 89.7% | 35.3% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 38.0 | 3.36e-01 | 100.0% | 47.7% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 41.0 | 2.76e-01 | 89.7% | 69.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3669526 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.60 | 49.0 | 3.73e-01 | 93.1% | 62.0% |
| 3480610 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.54 | 40.0 | 3.81e-01 | 81.0% | 97.1% |
| 2137571 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.52 | 41.0 | 3.18e-01 | 87.9% | 71.7% |
| 3202278 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 42.0 | 3.05e-01 | 89.7% | 31.8% |
| 3706858 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 39.0 | 3.19e-01 | 93.1% | 44.4% |
| 3725284 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 41.0 | 3.62e-01 | 100.0% | 60.0% |
| 3716479 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.50 | 43.0 | 3.04e-01 | 94.8% | 35.4% |