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JN371769.1__AFD02881.1__X__00040
Bact-VirJN371769.1__AFD02881.1__X__00040
Identity
- Accession:
- JN371769 ↗
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Galenevirus›
Synechococcus_phage_metaG-MbCM1
TaxID: 1079999
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-93
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e9xB02 | 1.20.58.1020 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 44.0 | 4.22e-01 | 74.2% | 98.2% |
| 4o8mD00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.52 | 40.0 | 2.84e-01 | 82.8% | 86.4% |
| 4ovsA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.51 | 41.0 | 2.91e-01 | 89.2% | 84.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238499 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.74 | 51.0 | 3.73e-01 | 71.0% | 81.3% |
| 3954295 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.66 | 42.0 | 3.39e-01 | 98.9% | 32.4% |
| 4022416 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 46.0 | 4.06e-01 | 76.3% | 57.0% |
| 4003535 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.56 | 43.0 | 3.10e-01 | 84.9% | 96.3% |
| 3660496 | 604.3.1.19 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF3475 | 0.56 | 45.0 | 3.37e-01 | 86.0% | 76.4% |
| 3391536 | 109.4.1.1393 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26715 | 0.56 | 38.0 | 2.48e-01 | 76.3% | 15.3% |
| 3600274 | 633.23.1.31 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DUF202 | 0.51 | 40.0 | 3.65e-01 | 84.9% | 62.4% |