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JN398368.1__AEL20057.1__GUMBIE_67__00067
Bact-VirJN398368.1__AEL20057.1__GUMBIE_67__00067
Identity
- Accession:
- JN398368 ↗
- Kingdom:
- phage
Quality
60.6
mean pLDDT
Taxonomy
TaxID: 2922991
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-38
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 59.0 | 4.32e-01 | 100.0% | 73.7% |
| 5ndxA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 47.0 | 2.75e-01 | 78.4% | 33.2% |
| 6sc4A00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.64 | 44.0 | 2.90e-01 | 75.7% | 77.4% |
| 5ijaA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.62 | 52.0 | 3.55e-01 | 100.0% | 87.8% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 42.0 | 2.81e-01 | 78.4% | 16.3% |
| 4mo1A00 | 1.10.274.110 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.59 | 45.0 | 3.09e-01 | 89.2% | 88.3% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.57 | 45.0 | 3.13e-01 | 100.0% | 25.2% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.55 | 46.0 | 3.45e-01 | 97.3% | 63.4% |
| 3gw6A02 | 1.20.5.1240 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Endo-n-acetylneuraminidase | 0.53 | 39.0 | 3.59e-01 | 83.8% | 84.6% |
| 2fd6U02 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 39.0 | 3.26e-01 | 100.0% | 65.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264636 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.75 | 55.0 | 3.20e-01 | 81.1% | 18.2% |
| 3914216 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.73 | 54.0 | 3.16e-01 | 81.1% | 16.2% |
| 3957641 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.73 | 63.0 | 5.54e-01 | 100.0% | 72.7% |