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JN412589.1__AEL97955.1__PATIENCE_46__00047
Bact-VirJN412589.1__AEL97955.1__PATIENCE_46__00047
Identity
- Accession:
- JN412589 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 1074308
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-102
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a6mB01 | 3.90.20.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › GrpE nucleotide exchange factor, coiled-coil domain | 0.69 | 37.0 | 3.42e-01 | 78.3% | 39.8% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 43.0 | 4.48e-01 | 97.6% | 77.0% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.63 | 49.0 | 3.76e-01 | 84.3% | 67.7% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 47.0 | 4.50e-01 | 97.6% | 69.1% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 32.0 | 3.30e-01 | 80.7% | 52.4% |
| 4dveA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.59 | 52.0 | 4.06e-01 | 100.0% | 85.7% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.55 | 40.0 | 3.56e-01 | 74.7% | 90.5% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.51 | 38.0 | 3.88e-01 | 77.1% | 96.2% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.51 | 47.0 | 3.58e-01 | 100.0% | 65.8% |
| 2wusS00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 36.0 | 3.71e-01 | 75.9% | 92.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261616 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.90 | 41.0 | 2.95e-01 | 77.1% | 18.5% |
| 4019297 | 2485.1.1.41 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 | 0.72 | 50.0 | 3.68e-01 | 72.3% | 62.4% |
| 3656025 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.62 | 43.0 | 3.34e-01 | 73.5% | 59.5% |
| 3284155 | 101.1.2.738 ↗ | alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C | 0.58 | 39.0 | 3.19e-01 | 89.2% | 38.0% |
| 3727612 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 49.0 | 3.80e-01 | 94.0% | 50.6% |
| 3785194 | 101.1.1.377 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF29033 | 0.52 | 36.0 | 3.08e-01 | 71.1% | 94.1% |
| 3992502 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.52 | 45.0 | 4.38e-01 | 94.0% | 88.9% |
| 3517388 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 39.0 | 3.05e-01 | 81.9% | 86.7% |
| 3587218 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 45.0 | 3.80e-01 | 92.8% | 74.6% |