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JN564907.1__AEY69540.1__AH2_00030__00030
Bact-VirJN564907.1__AEY69540.1__AH2_00030__00030
Identity
- Accession:
- JN564907 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Ahduovirus›
Burkholderia_phage_vB_BceS_AH2
TaxID: 1133022
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-58
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 59.0 | 4.55e-01 | 100.0% | 41.6% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.68 | 57.0 | 5.01e-01 | 100.0% | 68.4% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.67 | 56.0 | 4.20e-01 | 100.0% | 37.3% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.07e-01 | 74.0% | 68.3% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.26e-01 | 76.0% | 69.0% |
| 2kvvA00 | 1.10.1660.60 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 | 0.62 | 52.0 | 4.58e-01 | 100.0% | 67.9% |
| 1vx7Q02 | 3.30.60.300 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 34.0 | 4.07e-01 | 84.0% | 84.4% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 3.78e-01 | 78.0% | 50.0% |
| 6jgwA01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 50.0 | 3.92e-01 | 100.0% | 56.2% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 4.03e-01 | 76.0% | 60.3% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.14e-01 | 80.0% | 63.0% |
| 6oinA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.14e-01 | 100.0% | 65.7% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.46e-01 | 78.0% | 51.2% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.50e-01 | 94.0% | 61.5% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.54 | 44.0 | 3.29e-01 | 100.0% | 64.6% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.96e-01 | 100.0% | 66.2% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 3.84e-01 | 100.0% | 60.3% |
| 3k6jA02 | 1.10.1040.50 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › | 0.52 | 40.0 | 2.76e-01 | 90.0% | 84.9% |
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.52 | 41.0 | 3.52e-01 | 100.0% | 55.6% |
| 4i1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 2.99e-01 | 82.0% | 47.4% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 41.0 | 2.86e-01 | 92.0% | 50.5% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.51 | 40.0 | 3.20e-01 | 96.0% | 43.0% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 45.0 | 3.98e-01 | 98.0% | 68.1% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.38e-01 | 100.0% | 40.3% |
| 1m3qA02 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 37.0 | 3.24e-01 | 98.0% | 48.8% |
| 4iv6B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 40.0 | 3.17e-01 | 94.0% | 56.0% |
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.50 | 37.0 | 3.06e-01 | 90.0% | 47.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965196 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 67.0 | 6.33e-01 | 100.0% | 83.3% |
| 5000254 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 55.0 | 5.60e-01 | 100.0% | 94.0% |
| 3980161 | 101.1.9.45 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA | 0.67 | 56.0 | 5.47e-01 | 96.0% | 85.5% |
| 3282255 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.66 | 53.0 | 4.26e-01 | 100.0% | 43.5% |
| 3291061 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.65 | 54.0 | 4.20e-01 | 100.0% | 41.7% |
| 2775358 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.65 | 53.0 | 4.21e-01 | 100.0% | 43.6% |
| 3966276 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 53.0 | 4.25e-01 | 100.0% | 70.0% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.64 | 52.0 | 4.06e-01 | 100.0% | 40.9% |
| 3282573 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.64 | 52.0 | 3.97e-01 | 100.0% | 37.6% |
| 2325046 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.63 | 52.0 | 4.07e-01 | 100.0% | 40.8% |
| 3589820 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 50.0 | 3.85e-01 | 100.0% | 37.6% |
| 4527553 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 50.0 | 4.97e-01 | 100.0% | 87.3% |
| 3958148 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.62 | 51.0 | 3.87e-01 | 100.0% | 54.1% |
| None | — | 0.57 | 30.0 | 2.98e-01 | 100.0% | 45.5% | |
| 3496590 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 30.0 | 2.86e-01 | 100.0% | 41.7% |
| 4928573 | 183.1.1.5 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repress | 0.52 | 47.0 | 3.58e-01 | 100.0% | 68.7% |
| 3943344 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.52 | 46.0 | 3.35e-01 | 100.0% | 56.4% |
| 5022523 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.51 | 46.0 | 3.74e-01 | 100.0% | 55.8% |
| 5005057 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.51 | 45.0 | 3.49e-01 | 100.0% | 46.1% |
| 5042174 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.51 | 45.0 | 3.31e-01 | 100.0% | 57.0% |
| 3944712 | 101.1.9.40 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N | 0.51 | 41.0 | 3.40e-01 | 100.0% | 51.4% |
| 4254926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.74e-01 | 100.0% | 70.7% |